CV886736

Overview
NameCV886736
Unique NameCV886736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.435e-56
Identity = 114/156 (73.08%), Postives = 127/156 (81.41%), Query Frame = -3
Query:  434 GMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQNGVKMGLQ 901
            GMT +IALLSE+VV TIEDAS+SWG+SVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQI++FVVPL VI++WI+GI MDLNFN+LET S           LQDGTSHYMKG VLLLCY +I ACFFV   P     N + +GLQ
Sbjct:  296 GMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIP---QPNDLDVGLQ 448          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 5.483e-54
Identity = 108/162 (66.67%), Postives = 124/162 (76.54%), Query Frame = -3
Query:  416 GMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQNGVKMGLQSSTGTV 901
            GMT +IALLSE+VV TIE+AS+ W +SVSFISIILLPIVGNAAEHAGA+IFAFKNKLDISLGVALGSATQI +FVVPL +I++WI+GI MDLNF  LETG            LQDG+SHYMKG VLLLCYF+I  CFFV   P    QN + +G Q+    V
Sbjct:  294 GMTLVIALLSEYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGSATQIGLFVVPLTIIVAWILGINMDLNFGPLETGCLAVSIIITAFTLQDGSSHYMKGLVLLLCYFIIAICFFVDKLP--QKQNAIHLGHQAMNNVV 453          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.483e-54
Identity = 108/165 (65.45%), Postives = 132/165 (80.00%), Query Frame = -3
Query:  407 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPL-DSDQNGVKMGLQSSTGTVLRA 898
            MTA+I++LSE+VVGTIE  S SWG+SVSFISIILLPIVGNAAEHAGAIIFA KNKLDI+LGVALGSATQI++FVVPL V+++WIMG+ MDL+F LLETGS           LQDGTSHY+KG +LLLCY VIGACFFV+ +P   ++ NG  + + + + +V  A
Sbjct:  287 MTAVISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQPAGHANSNGALLDVPTGSMSVQAA 451          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.547e-51
Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = -3
Query:  473 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRP 898
            MT ++ALLS+++V TI+DA++SWG+SV FI IILLPIVGNAAEHAGA+IFAF+NKLDI+LG+ALGSATQIA+FVVP+ V+++W MGI MDLNFNLLET             LQDGTS+YMKG VLLLCY VI ACFFVSN P
Sbjct:  299 MTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSP 440          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.914e-47
Identity = 97/150 (64.67%), Postives = 115/150 (76.67%), Query Frame = -3
Query:  449 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQNGV 898
            MT + ALLS +VV TIE AS SW +SVSFISIILLPIVGNAAEHAGA+IFA KNK+DI+LGV+LGSATQI++FVVP+ VI++W MGI MDL+FNLLETGS           LQ+G SHY+KG +L+LCY VI  CFFV  R      +GV
Sbjct:  297 MTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFVIRRRSAGGTDGV 446          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.073e-41
Identity = 88/139 (63.31%), Postives = 103/139 (74.10%), Query Frame = -3
Query:  485 GMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFV 901
            GM  + A+LS +VV TIE+AS S GI V FISIILLPIVGNAAEHAGAIIFAFKNK+DISLG+ LGSATQI++ VVP+ +I+SW+  I MDL+FNLLETGS           LQD   HY+KG  L+  Y VI  CFFV
Sbjct:  300 GMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFV 438          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.121e-41
Identity = 83/146 (56.85%), Postives = 106/146 (72.60%), Query Frame = -3
Query:  461 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSD 898
            +TA ++LLS ++V  IE AS SW I +SFIS+ILLPIVGNAAEHAGAI+FA K+KLD+SLGVA+GS+ QI++F VP CV+I W+MG  MDLNF L ET +           LQ+GTS+Y KG +L+LCY ++ A FFV   P   D
Sbjct:  295 LTAWVSLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPHQDD 440          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.506e-40
Identity = 80/146 (54.79%), Postives = 108/146 (73.97%), Query Frame = -3
Query:  461 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSD 898
            +T  +++LSE++V  IE AS+S  + V+FIS+ILLPIVGNAAEHA AI+FA K+KLDI+LGVA+GS+TQI++FV+P CV+I W+MG  MDLNF L ET +           LQDG ++Y+KG +L+LCY ++ A FFV   P  SD
Sbjct:  271 LTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSD 416          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.237e-39
Identity = 80/142 (56.34%), Postives = 103/142 (72.54%), Query Frame = -3
Query:  473 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRP 898
            +TA ++LLS ++V  IE AS SW I ++FIS ILLPIVGNAAEHAGAI+FA K+KLD+SLGVA+GS+ QI++F VP CV+I W+MG  MDLNF L ET             LQ+G+S+Y KG +L+LCY ++ A FFV   P
Sbjct:  295 LTAWVSLLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLILCYLIVAASFFVHEDP 436          
BLAST of CV886736 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.499e-39
Identity = 82/148 (55.41%), Postives = 107/148 (72.30%), Query Frame = -3
Query:  455 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQN 898
            +T  I++LS ++V  I+ AS S  + V+FIS+ILLPIVGNAAEHA AI+FA K+KLDI+LGVA+GS+TQI++FV+P CV+I WIMG  MDLNF L ET +           LQ+GTS+Y KG +L+LCY ++ A FFV   P DS  N
Sbjct:  290 LTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDP-DSSNN 436          
The following BLAST results are available for this feature:
BLAST of CV886736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CAX3_ARATH3.435e-5673.08Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1_ARATH5.483e-5466.67Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX1A_ORYSJ5.483e-5465.45Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH2.547e-5169.72Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ2.914e-4764.67Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ1.073e-4163.31Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX5_ARATH3.121e-4156.85Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX3_ORYSJ4.506e-4054.79Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]
CAX2_ARATH2.237e-3956.34Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]
CAX2_ORYSJ8.499e-3955.41Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_024H07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_024_T7_H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886736 ID=CV886736; Name=CV886736; organism=Citrus sinensis; type=EST; length=903bp
TTTTTTTTTTTTTTTTAGACAATGAATTCCCATTTTATTATGATGATGGT
ATTACAAGAGCCGAGAAATTACCATCACTCAAACGAAGAGTAAATGCATA
TACCGACATACGAAATAAACTTTCACTCAGTTAAAAAAAACCATCTGAGA
GAGATCTTTAGAACATTACATATACTTTAACCTGCGCTGCCTTCATCAAG
CTTCAATGGCACCAATTCACTTTGAAATGTTTCATCTCAAATGAGAAGGC
ATCCATGGAAACTTTCTCGACATGTAAAATGCTATGCCCGGCTTCTAAAT
TCCAGCTGGCGACGCCAAATGAAAGAATTAGCAATGCACCTTATATTTGA
AAGTTTCAATGACGAATTGAAGAGTCTGACCCCAGAAGGCCCAATTAGTC
TTATCATGCTCTGAGGACTGTTCCAGTTGATGATTGAAGGCCCATTTTGA
CCCCATTCTGGTCGGAGTCGAGTGGTCTGTTGGATACAAAAAAGCATGCT
CCAATAACAAAGTAGCATAGCAGAAGAACAAATCCTTTCATGTAATGAGA
AGTTCCATCCTGTAGAGTGAAGGCTGTGGCAATAATTGCTAGAGCAAGAG
AGCCAGTCTCAAGGAGATTGAAGTTAAGATCCATTGTAATCCCCATAATC
CAAGAAATAATCACGCACAATGGAACCACAAATACGGCAATTTGAGTTGC
AGAACCCAACGCAACACCCAGTGAAATGTCCAACTTGTTTTTGAAAGCAA
AAATGATTGCTCCTGCATGTTCAGCTGCATTTCCAACAATTGGTAGCAAG
ATAATGCTGATAAAGCTCACAGAAATCCCCCAAGAATTTGAAGCATCCTC
AATTGTGCCCACTACAAATTCTGATAGTAAAGCAATGATAGCAGTCATCC
CAA
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