EY665576

Overview
NameEY665576
Unique NameEY665576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665576 vs. ExPASy Swiss-Prot
Match: CS028_HUMAN (Uncharacterized MFS-type transporter C19orf28 OS=Homo sapiens GN=C19orf28 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.640e-15
Identity = 71/277 (25.63%), Postives = 122/277 (44.04%), Query Frame = 3
Query:   75 ILFIPLVNCITLNSTSRSFLTSCRNAFTMVANLTLYAIAFIVFRV-----TTPKTHADLENQ--------YRWIAYSSIFIGCCFVAIFLSRTEEPRL*MGLRGNTHARIS----------WAHWFKKILYYQAALVYLLTRLVVNDPHAYLAFYDINDLRMDQSAKALDPAIIYICSFILSILLQEMPWTGQRLNAYYSARGDLWVFCAAWILILPMNMSAFMYVLAIFGGLPNAIKRVTGIRMQNVLNGQKSELAAHLFGDP*SFLEQNVVGGVA 836
            I  + L+  +  N   +  LT+ R AFT+VAN+T+Y  A+++  +       P     + +Q        +R ++   + +G  F  +F   T E R         H  +           W HW ++  +YQ  ++Y+ TRL+VN    Y+A Y    L + +   A  P ++Y+  F+ S L++ +     R   Y+S    +  F AAW+  L   +   +Y  A+  G   A   VT + M   L G  +   A ++G   SFL++ V  G+A
Sbjct:  147 ISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISDQLGGQDVPVFRNLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLVILAF-AAWV-ALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSM-SFLDK-VANGLA 419          
BLAST of EY665576 vs. ExPASy Swiss-Prot
Match: CS028_MOUSE (Uncharacterized MFS-type transporter C19orf28 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 65/262 (24.81%), Postives = 114/262 (43.51%), Query Frame = 3
Query:   75 ILFIPLVNCITLNSTSRSFLTSCRNAFTMVANLTLYAIAFIVFRVTTPKTHADLENQ------------YRWIAYSSIFIGCCFVAIFLSRTEEPRL*M--GLRGNTHARIS---------WAHWFKKILYYQAALVYLLTRLVVNDPHAYLAFYDINDLRMDQSAKALDPAIIYICSFILSILLQEMPWTGQRLNAYYSARGDLWVFCAAWILILPMNMSAFMYVLAIFGGLPNAIKRVTGIRMQNVLNGQKSELAAHLFG 791
            I  + L+  +  +   +  LT+ R AFT+VAN+T+Y  A+++  +     H + +              +R +A   + +G  F  +F   T+E       G   N H  +          W HW ++  +YQ  ++Y+ TRL+VN    Y+A Y    L + +   A  P ++Y+  F  S L++ +     R   Y++    +  F AAW+  L  N+   +Y  A+  G   A   VT + M   L G  +   A ++G
Sbjct:  144 IAHLSLIPELVTSDHEKVELTALRYAFTVVANITVYGAAWLLLHLQG-SAHGEQDISVGDQLGVQDVPVFRNLALLVVGVGAIFSLLFHLGTKEGHRSQHWGNEPNEHTPLVAPAAQPLLLWKHWLREPAFYQVGMLYMTTRLIVNLSQTYIAMYLTYSLSLPKKFIATIPLVMYLSGFFSSFLMKPVNRRIGRNMTYFTGLLVILAF-AAWV-ALADNLGVAVYGAAVLLGAGCATILVTSLAMTADLIGPHTHSGAFVYG 402          
The following BLAST results are available for this feature:
BLAST of EY665576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CS028_HUMAN1.640e-1525.63Uncharacterized MFS-type transporter C19orf28 OS=H... [more]
CS028_MOUSE2.618e-1324.81Uncharacterized MFS-type transporter C19orf28 homo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665576 ID=EY665576; Name=EY665576; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTGGGAATAATTTTTTTCGCACGCAGTACGGTCCGGATTCCGG
GTCGACCACGCGTCCGGAGTAATCATCCTCTTCATCCCTTTGGTGAATTG
CATCACATTAAATTCAACAAGCAGATCCTTTCTGACAAGCTGCCGCAATG
CTTTTACAATGGTTGCCAACCTCACCCTGTACGCTATTGCTTTTATAGTG
TTTAGAGTGACTACACCAAAAACGCATGCTGATCTTGAAAATCAGTATCG
ATGGATTGCATACTCATCAATTTTTATTGGATGCTGCTTTGTGGCAATAT
TTCTTTCCAGAACTGAAGAACCAAGATTATAGATGGGTTTGCGAGGAAAT
ACTCATGCAAGGATTTCATGGGCTCACTGGTTCAAGAAAATTTTGTACTA
TCAAGCTGCTCTCGTCTACCTGCTCACCAGACTAGTAGTTAATGATCCAC
ACGCATATCTTGCATTTTATGACATTAATGATTTGCGAATGGATCAATCT
GCTAAAGCATTGGATCCTGCCATCATCTACATATGCAGCTTCATACTATC
CATCCTTCTTCAAGAAATGCCATGGACCGGCCAGCGCCTGAATGCTTACT
ATTCTGCTAGAGGCGATCTTTGGGTATTTTGTGCTGCATGGATCCTTATC
TTACCTATGAACATGAGTGCCTTCATGTATGTTCTAGCAATATTTGGTGG
CCTCCCAAATGCTATAAAGAGGGTAACTGGAATAAGAATGCAAAATGTGC
TGAATGGGCAAAAATCTGAATTGGCTGCGCATTTGTTTGGAGACCCTTGA
AGCTTCCTGGAACAAAATGTCGTGGGGGGAGTGGCGGGGTAATGTTCTCC
CCGCCATAAAAAAGGATTGTCCACCCG
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