EY665575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665575 vs. ExPASy Swiss-Prot
Match: PSBS_TOBAC (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum GN=PSBS PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.778e-36 Identity = 70/82 (85.37%), Postives = 79/82 (96.34%), Query Frame = 1 Query: 1 GRPIFAFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 246 G P+F FTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG+PINEIEPL+LFN++FFFVAA+NPGTGKFVTDE+EE Sbjct: 193 GGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274 HSP 2 Score: 88.5817 bits (218), Expect = 1.087e-17 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 19 FTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALN--PGTGKFVTD 234 FTK NELFVGR+A +G A SL+GE ITGKG LAQLN+ETGIPI E EPL+LF ++F + A+ GKF+ D Sbjct: 93 FTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDD 166
BLAST of EY665575 vs. ExPASy Swiss-Prot
Match: PSBS_SPIOL (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.576e-35 Identity = 69/80 (86.25%), Postives = 77/80 (96.25%), Query Frame = 1 Query: 7 PIFAFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 246 P+F FTKSNELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PINEIEPLVL NV+FFF+AA+NPGTGKF+TD++EE Sbjct: 194 PLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273 HSP 2 Score: 84.3445 bits (207), Expect = 2.050e-16 Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 19 FTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 234 FTK NELFVGR+A +G A SL+GE ITGKG L+QLN+ETGIPI E EPL+LF ++F + A+ G+FV + Sbjct: 94 FTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE 167
BLAST of EY665575 vs. ExPASy Swiss-Prot
Match: PSBS_SOLSG (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum GN=PSBS PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.669e-34 Identity = 67/82 (81.71%), Postives = 77/82 (93.90%), Query Frame = 1 Query: 1 GRPIFAFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 246 G P+F FTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+ Sbjct: 195 GGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276 HSP 2 Score: 87.4261 bits (215), Expect = 2.422e-17 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 19 FTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 234 FTK NELFVGR+A +G A SL+GE ITGKG LAQLN+ETGIPI E EPL+LF ++F + A+ G+F+ D Sbjct: 95 FTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDD 168
BLAST of EY665575 vs. ExPASy Swiss-Prot
Match: PSBS_SOLLC (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum GN=PSBS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.669e-34 Identity = 67/82 (81.71%), Postives = 77/82 (93.90%), Query Frame = 1 Query: 1 GRPIFAFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 246 G P+F FTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+ Sbjct: 195 GGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276 HSP 2 Score: 88.9669 bits (219), Expect = 8.324e-18 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 19 FTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 234 FTK NELFVGR+A +G A SL+GE ITGKG LAQLN+ETGIPI E EPL+LF ++F + A+ GKFV D Sbjct: 95 FTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168
BLAST of EY665575 vs. ExPASy Swiss-Prot
Match: PSBS_ARATH (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.196e-32 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 7 PIFAFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 246 P+F FTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE Sbjct: 185 PLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264 HSP 2 Score: 88.9669 bits (219), Expect = 8.324e-18 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 19 FTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 234 FTK+NELFVGR+A +G A SL+GE +TGKG LAQLN+ETGIPI E EPL+LF ++F + A+ GKFV D Sbjct: 85 FTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD 158 The following BLAST results are available for this feature:
BLAST of EY665575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665575 ID=EY665575; Name=EY665575; organism=Citrus sinensis; type=EST; length=381bpback to top |