EY665572

Overview
NameEY665572
Unique NameEY665572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665572 vs. ExPASy Swiss-Prot
Match: Y4105_ARATH (Uncharacterized protein At4g01050 OS=Arabidopsis thaliana GN=At4g01050 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.631e-38
Identity = 109/251 (43.43%), Postives = 138/251 (54.98%), Query Frame = 2 
Query:   68 MEALNPAGLIPLSVLCDRRSEPRKIQSLSTASLPKLATSASNKTTQQNFLECFAKXXXXXXXXXXXXXXXXXAQALTYEEALQQXXXXXXXXXXXXXFIDSVISFGTENPLAIAGGVTILAVPLVLSQVLNK-PKSWGVESARNAYAKLGDDASAQLLDIRAPVEFRQVGSPDVRGLGK-----------RPGFDCLQR*TIXXXXXXXXXXXXXNQKILHCSF*TNLMGNSEWVAELVTLNGIQNGYPYK 784
            MEAL  A   P+SVL ++RSEPRK  SL     PK    +    +Q++FL+ F                   A++LTYEEALQQ              I+ + +F T+NPL IAGGV  LAVP VLSQVLNK PKSWGVESA+NAY KLG D +AQLLDIRA  +FRQVGSP+++GLGK           +PGF  L++ ++             ++            GNSE VAELV LNG ++ Y  K
Sbjct:    1 MEALKTATFSPMSVLSEKRSEPRKPFSLPNLFPPK----SQRPISQESFLKRF--NGGLALLTSVLSSATAPAKSLTYEEALQQSMTTSSSFDSDG-LIEGISNFVTDNPLVIAGGVAALAVPFVLSQVLNKKPKSWGVESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGF--LKKLSLKFKDPENTTLYILDK----------FDGNSELVAELVALNGFKSAYAIK 232
The following BLAST results are available for this feature:
BLAST of EY665572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4105_ARATH8.631e-3843.43Uncharacterized protein At4g01050 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665572 ID=EY665572; Name=EY665572; organism=Citrus sinensis; type=EST; length=858bp
GGAGCTGAGTACGGTCGGATTCCGGGTCGACCCCGCGTCCGCCAAAAGAT
CATATAAAATTACTGTCATGGAGGCCCTCAATCCAGCGGGCTTGATACCT
TTATCGGTTCTTTGTGACAGAAGATCAGAACCCAGAAAAATTCAATCACT
TTCCACGGCTTCTTTACCCAAACTCGCAACTTCTGCTTCTAATAAAACCA
CCCAACAAAATTTTCTAGAGTGTTTTGCAAAGAGTGTGCATGGCGGTTTA
GTGCTGTTATCTTCAGTTCTTGGTACTGGTTTAGCTCAAGCTTTAACATA
TGAAGAAGCGCTGCAGCAGTCAGCAGGCTCTTCAGCATCTGATGTTGATG
CAAGTGGATTTATTGACAGCGTAATCAGTTTTGGAACAGAGAATCCTTTA
GCTATAGCTGGTGGTGTCACCATTTTGGCTGTTCCATTAGTTTTGTCTCA
GGTTCTGAACAAGCCTAAGTCATGGGGTGTTGAGTCTGCAAGGAATGCTT
ATGCAAAGTTGGGTGACGATGCGAGTGCCCAGTTGCTTGATATAAGAGCT
CCCGTGGAATTTCGGCAAGTAGGTAGTCCTGATGTCCGGGGTTTGGGGAA
GAGGCCGGGTTTCGATTGTTTACAAAGGTGAACGATAAGCCGGGCTTCTT
GAAGAAGCTGTCTTTGAAGTTCAAGGAACCAGAAAATACTACATTGTTCA
TTCTAAACAAATTTGATGGGAAACTCTGAATGGGTGGCTGAGTTGGTCAC
CCTAAATGGAATTCAAAATGGATACCCCTATAAAAGAAGGAACCAAAAGG
ACCTCGTGGGAGGGATGAACAGGGGGTCTTCCTTTGGAAACCCGCCAAAA
AAAAGAAT
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