EY665569

Overview
NameEY665569
Unique NameEY665569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1201 contig Csv1_Contig1201:85..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665569 vs. ExPASy Swiss-Prot
Match: YOOF_SCHPO (Uncharacterized hydroxylase C887.15c OS=Schizosaccharomyces pombe GN=SPBC887.15c PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.552e-20
Identity = 66/186 (35.48%), Postives = 91/186 (48.92%), Query Frame = 3
Query:  240 PILVYWLYSGL-----YVVLGSFDKLDNYRLHSRIDEDEKNLVSKGDVVKGVLLQQFFQAIVAILLFAVTGNGAGA-EANQ----------------QSSP---------IAIARQFVIAMLGMDTWQYFMHTYMHHNKFLYRTHPFLYNHRLVVPYAFGTLYNHPLEGLLNDTMGGTLSFLVPGM 704
            P+++YW+ S       Y+ L  F+K   YR+H   +   +N V +  VVK VL QQ  + +V I L    G      EA Q                Q +P         I  A Q+  A   +D+WQYF H Y+H+NK LY      ++HRL VPYA G LYNHP EGL+ DT G  +++L  G+
Sbjct:   21 PVIIYWVASAFFGFLHYIELPVFEK---YRIHPPEEIARRNRVPQMAVVKAVLFQQLCEVVVGIALAMFEGYPEPIDEAKQMLRYEAFFSKNLPALLQVAPFAPKLAYNFIVPAFQYFFAFFIIDSWQYFWHRYLHYNKKLYNM-IHAHHHRLQVPYAMGALYNHPFEGLILDTFGAGVAYLAAGL 202          
BLAST of EY665569 vs. ExPASy Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae GN=SUR2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.950e-19
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  210 ISDELLGTFVPILVYWLYSGLYVVLGSFDKLDNYRLHSRIDEDEKNLVSKGDVVKGVLLQQFFQAIVAILL-----FAVTGNGAGAEANQQSSPIAI---------------ARQFVIAMLGMDTWQYFMHTYMHHNKFLYRTHPFLYNHRLVVPYAFGTLYNHPLEGLLNDTMG 674
            +SD +L    P++ YW  SG++ V+ +F   + YR+H   +  ++N  S+  V   V+LQ   Q IV ++        +TG    A    ++    I               A +     L +DTWQYF+H  MH NK LY+    ++ H L VPYA+G L+N+P+EG L DT+G
Sbjct:   46 MSDGVLALVAPVVAYWALSGIFHVIDTFHLAEKYRIHPSEEVAKRNKASRMHVFLEVILQHIIQTIVGLIFMHFEPIYMTGFEENAMWKLRADLPRIIPDAAIYYGYMYGMSALKIFAGFLFVDTWQYFLHRLMHMNKTLYKWFHSVH-HELYVPYAYGALFNNPVEGFLLDTLG 219          
The following BLAST results are available for this feature:
BLAST of EY665569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YOOF_SCHPO4.552e-2035.48Uncharacterized hydroxylase C887.15c OS=Schizosacc... [more]
SUR2_YEAST2.950e-1932.57Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665569 ID=EY665569; Name=EY665569; organism=Citrus sinensis; type=EST; length=831bp
ATTAATTTTCTAAAAGCTACCGGTAATTGCGTTTGCATAAAAGGAAAGGG
CCTGTTTTTTCCCGATTAGTTAGTTGTCAAACAAACACAGCTTAGGGTTT
TGGTTGGTTTATCTCGTAAGAGCATTAATACTTTATATATTCGCAATAAA
AGTTTAGGGCACTTTGAGCGAGTGTCCCGTTGGCGATCGTCAACACGATG
GCGTTTACGATTTCCGACGAATTGTTGGGCACTTTCGTCCCAATTTTAGT
CTATTGGTTGTATTCAGGATTATACGTCGTTCTTGGATCTTTTGATAAGC
TTGATAATTATAGATTGCATTCGAGAATTGACGAGGACGAGAAAAATTTG
GTCTCTAAGGGCGATGTCGTTAAAGGCGTTCTCCTTCAGCAATTTTTTCA
GGCTATTGTTGCAATTCTCTTGTTTGCGGTGACAGGAAATGGTGCTGGGG
CAGAAGCCAATCAACAGTCTTCTCCAATTGCTATAGCTCGGCAGTTTGTT
ATAGCAATGTTGGGTATGGATACATGGCAGTATTTTATGCACACGTACAT
GCACCACAACAAGTTTTTGTATCGAACACATCCATTTCTCTACAATCACC
GCCTTGTTGTCCCCTATGCATTTGGAACTTTGTATAATCACCCCCTTGAG
GGGCTTCTTAATGACACAATGGGGGGAACCTTATCTTTTCTCGTTCCCGG
AATGTCTCCCCGGAGTCTCCTTCTTCTTTCTTTTCCTTTGCCCCCCTTAA
AAACAGTGGGATGAACCCTGGGGGGTTTTTTGGTTTCCTTGGAAACCCTC
TTTCCCGGGGTCTTCCAAAAAAAAAACTTGC
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