EY665558

Overview
NameEY665558
Unique NameEY665558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:814..1564. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.357e-68
Identity = 135/174 (77.59%), Postives = 145/174 (83.33%), Query Frame = 1
Query:   19 NSGSTTRPAGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 540
            +SG  +  AGQIDR+LSWKDV+WLQTIT LPILVKGVLT ED              SNHGARQLDYVPATI ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV+SLAAEGE GVR+VL+MLR+EFEL MALSGCRSLKEI+R+HI TEWD   PRP  RL
Sbjct:  196 DSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDT--PRPSARL 367          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.948e-68
Identity = 131/174 (75.29%), Postives = 146/174 (83.91%), Query Frame = 1
Query:   19 NSGSTTRPAGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 540
            +SG  +  AGQIDR+LSWKD++WLQTIT +PILVKGVLT ED              SNHGARQLDYVPATI ALEEVVKATQGR+PVFLDGGVRRGTDVFKALALGASGIFIGRPVV++LAAEGE GV++VL+MLR+EFEL MALSGCRSL EITR+HIVTEWD   PR +PRL
Sbjct:  196 DSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWDT--PRHLPRL 367          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.559e-67
Identity = 129/174 (74.14%), Postives = 144/174 (82.76%), Query Frame = 1
Query:   19 NSGSTTRPAGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 540
            +SG ++  AGQIDRSLSWKDV WLQTIT+LPILVKGV+TAED              SNHGARQLDYVPATIMALEEVVKA QGRIPVFLDGGVRRGTDVFKALALGA+G+FIGRPVV+SLAAEGE GV++VL+M+R+EFEL MALSGCRSLKEI+R HI  +WD    R V RL
Sbjct:  196 DSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 369          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45
Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 1
Query:   10 YGRNSGSTTRPAGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 486
            +G NSG     A  ID SLSW D+ WL+ +T+LPI+VKG+L  +D              SNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+++ LA +GEKGV+ VLE+L+EEF LAMALSGC+++K I +
Sbjct:  199 FGDNSGLAEYVAQAIDPSLSWDDITWLRRLTSLPIVVKGILRGDDAKEAVKHGVDGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.696e-45
Identity = 88/159 (55.35%), Postives = 117/159 (73.58%), Query Frame = 1
Query:   10 YGRNSGSTTRPAGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 486
            +G +SG     A  ID S+SW+D+KWL+ +T+LPI+ KG+L  +D              SNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+V+ LA +GEKGV+ VLE+L+EEF LAMALSGC+++K I +
Sbjct:  199 FGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.850e-39
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 1
Query:   52 IDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 495
            ID S+ W+D+ W Q++T LPI++KG+LT ED              SNHG RQLD VPA+I AL EVV A +G++ V+LDGG+R G DV KALALGA  +F+GRP+++ LA +GE GV+ VL++L+ EF  +M L+GCRS+ EI +D I
Sbjct:  201 IDPSICWEDLSWFQSMTRLPIILKGILTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEINQDLI 348          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.560e-38
Identity = 80/146 (54.79%), Postives = 100/146 (68.49%), Query Frame = 1
Query:   52 IDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 489
            I  SL W D+ W Q+IT LPI++KG+LT ED              SNHG RQLD V A+I AL EVV A +G+I V+LDGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL +L  EF  +MAL+GCRS+ EI R+
Sbjct:  199 ISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.262e-38
Identity = 81/161 (50.31%), Postives = 103/161 (63.98%), Query Frame = 1
Query:   13 GRNSGSTTRPAGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 495
            G +      P      S  W D+  LQ++T LPI++KG+LT ED              SNHG RQLD VPA+I AL EVV A  G+I V++DGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL++L+EE    MALSGCRS+ EI+ D I
Sbjct:  188 GESKSGLPTPLSMPSSSSCWNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEISPDLI 348          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.514e-35
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 1
Query:   43 AGQIDRSLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 510
            A  ID SL+W D+KWL++IT LPILVKG++  +D              SNHG RQLD  P+TI  L  + K  +GR+P+ LDGG+RRGTDV KALA GA+ + IGRP+++ L+  G+ GV +VL +L  E +LAMAL+G  ++ +I    I   WD
Sbjct:  229 ATMIDPSLTWNDLKWLKSITKLPILVKGIMCPKDAELALQYGADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLLNSELQLAMALTGITNISDINNSII---WD 381          
BLAST of EY665558 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.583e-35
Identity = 77/145 (53.10%), Postives = 98/145 (67.59%), Query Frame = 1
Query:   61 SLSWKDVKWLQTITTLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 495
            S  W D+  LQ+IT LPI++KG+LT ED              SNHG RQLD V A+I AL EVV A +G+I V++DGGVR GTDV KALALGA  IF+GRP+++ LA +GE GV+ VL++L  E    M LSGC+S+ EI+ D I
Sbjct:  204 SFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLI 348          
The following BLAST results are available for this feature:
BLAST of EY665558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX2_ARATH1.357e-6877.59Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH3.948e-6875.29Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
GOX_SPIOL2.559e-6774.14Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
HAOX1_MOUSE3.596e-4555.97Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX1_HUMAN4.696e-4555.35Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX2_BOVIN3.850e-3952.03Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
HAOX2_HUMAN5.560e-3854.79Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX2_MOUSE7.262e-3850.31Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
HAOX_DICDI1.514e-3547.44Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_RAT2.583e-3553.10Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665558 ID=EY665558; Name=EY665558; organism=Citrus sinensis; type=EST; length=767bp
TGCACTGAGTACGGTCGGAATTCCGGGTCGACCACGCGTCCGGCTGGTCA
AATTGATCGTTCTCTTAGCTGGAAGGACGTGAAGTGGCTTCAAACAATCA
CCACATTGCCAATTCTGGTGAAGGGTGTACTCACAGCAGAGGATGCGCGG
ATTGCAGTTCAAGCTGGAGCAGCTGGGATTATTGTATCCAATCATGGAGC
TCGTCAACTTGACTATGTCCCTGCCACTATCATGGCCCTGGAAGAGGTTG
TGAAAGCTACTCAGGGGCGTATTCCTGTGTTCTTGGATGGTGGTGTTAGG
CGAGGAACTGATGTCTTCAAAGCCTTGGCACTTGGAGCCTCTGGTATATT
TATTGGACGACCAGTGGTGTACTCATTGGCAGCTGAGGGAGAGAAAGGCG
TTAGAAGAGTACTCGAGATGCTGCGTGAAGAATTTGAGCTAGCAATGGCA
CTAAGTGGTTGCCGCTCACTCAAAGAGATTACTCGTGATCACATCGTCAC
TGAATGGGATGCTTCTCTCCCTCGTCCGGTTCCCAGGTTATAGATACGTG
CATGCAAAATAGAAGAAAGAGCAATAATTTGGTTACTTTCTATTACTTCT
TTTTCTTGGAGAACTTGTTCATGTTTAATTGAGTCTGAATTATTTTAAGC
TTCTGGTATGATGATTATGGCTACTTCTGCCCTTTCCTGTATATTCTTCT
TTAAAACTTTATTCTATATAATTTTTGCTCGGATGTTTATTGATAAAAAA
AAAAAAAAAAAAAAGGG
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