EY665556

Overview
NameEY665556
Unique NameEY665556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig388 contig Csv1_Contig388:13..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY665556 vs. ExPASy Swiss-Prot
Match: MU136_SCHPO (Meiotically up-regulated gene 136 protein OS=Schizosaccharomyces pombe GN=mug136 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12
Identity = 51/195 (26.15%), Postives = 91/195 (46.67%), Query Frame = 1 
Query:  268 SKSAYPLVVAILPDVPEEHREVLRSQGCIVREIDPIYPPE-----NQIQFAMAYYVINYSKLRIWNFEEYSKMIYLDADIQVFENIDHLFDL-------------PDGFFYAVMDCFCEKTWSHSPQYSIGYCQQRPNKVTWPAEMG----SPPPL--YFNAGMFVFDPNRLSYENLL---QTPQITPQHHLAEQ 771
            +KS YP+VV  +  + +   + L+  G IV+ +DP+Y  E     N I    + + + ++KLR++   EY ++ +LD+DI   + +D +FD+             P  F+      F  +       Y +      P      ++ G    +PPP   YFNAG+FVF P +  Y+ L+   + P++    ++ EQ
Sbjct:   99 TKSKYPVVVLAMKGIDQWKLDQLQEDGAIVKVVDPLYAHEVVDDVNDIALLDSRWSMMFTKLRVFEMYEYDRICFLDSDILPIKKMDKVFDVHQLSYSKDSVLFPPTLFYKPRRSIFWRRFTEEFAAYGLTRDDLYPYVFAAVSDPGMWHETPPPFKDYFNAGLFVFKPLKAHYKRLMALARFPKLYDNANMMEQ 293
The following BLAST results are available for this feature:
BLAST of EY665556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MU136_SCHPO5.192e-1226.15Meiotically up-regulated gene 136 protein OS=Schiz... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-H06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665556 ID=EY665556; Name=EY665556; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGTGGCATCCCAAGTGTTTCTGGTTTACTTCACCTAAAAT
CCTCGACACCAATCTTCTAAGCTTTCCCAAAACATCATCAACAAATTAAA
GCCTTACAAAATCAACTGCAATGGCCCCTGGAGTGGCTGAAGATGCCTTT
TCAGGAAATGGAAAGATTTCTAGCACAGGCTATTCTAAAAGAGCCTTTGT
AACATTTTTAGCCGGTAGTGGTGACTATGTTAAAGGGGTGGTTGGTTTGG
CCAAGGGTTTGAGAAACTCCAAGAGTGCATACCCCCTAGTGGTTGCAATT
TTGCCTGATGTGCCTGAAGAACACCGTGAGGTCTTAAGGTCTCAGGGTTG
CATCGTTCGTGAAATCGACCCTATTTATCCTCCAGAGAACCAGATTCAAT
TTGCCATGGCCTACTATGTGATCAACTACTCTAAGCTCCGTATATGGAAT
TTTGAGGAGTACAGCAAGATGATTTACCTGGATGCTGATATTCAGGTGTT
TGAGAATATAGACCATTTGTTTGACTTGCCGGACGGGTTCTTCTATGCTG
TAATGGACTGCTTTTGTGAGAAGACATGGAGCCATTCGCCGCAATACTCA
ATTGGGTATTGCCAGCAGCGCCCGAATAAAGTGACATGGCCAGCTGAGAT
GGGATCGCCTCCTCCATTGTACTTCAATGCTGGGATGTTTGTGTTTGACC
CTAACCGTTTATCTTACGAGAATCTTCTCCAGACTCCTCAGATCACCCCA
CAACACCATTTAGCTGAACAGATTTCCTGAATATGTCCTTCAAAAGACGT
ACAAACCCATCCCTTGGGCTTAAACCCTTGCTGTAACCATGTAATGGGCC
CACCCAGAAAAACAGGAACTTTGAAAAAATTAAAGCGGTTCCTTAACGGG
C
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