EY665549

Overview
NameEY665549
Unique NameEY665549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8011 contig Csv1_Contig8011:1..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665549 vs. ExPASy Swiss-Prot
Match: CBBY_RHOCA (Protein cbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.796e-17
Identity = 56/157 (35.67%), Postives = 87/157 (55.41%), Query Frame = 1
Query:  283 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAGTAIVSFLLGPERAEKIQIF-AGDVVSPQK 750
            AL+FD DG L +TE + HR +FN+TF  + L   W  + Y  LL+  GGKERM  +    G     PSD +     IA LHK KT+ ++ +I    + L PGVA+LID+A   G+++A+ +T+      A+++        +  ++  AGD V+ +K
Sbjct:    5 ALIFDVDGTLAETE-EVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHRENLG---SGPSDAK-----IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIATTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKK 152          
BLAST of EY665549 vs. ExPASy Swiss-Prot
Match: CBBY_RHOSH (Protein cbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17
Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 1
Query:  283 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAGTAIVSFLLG-PERAEKIQIFAGDVVSPQK 750
            A+LFD DG L +TE + HR +FN+TF    +   WD + Y ELL   GGKER+  +  ++ G P   P         IA +H+ KTE F+ L+ +  + LRPG+A LI +A   G+++AV +T++     A+     G P R     I AGD+V+ +K
Sbjct:    4 AILFDVDGTLAETE-ELHRRAFNETFAALGVDWFWDREEYRELLTTTGGKERIARFLRHQKGDPAPLP---------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAVATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKK 151          
BLAST of EY665549 vs. ExPASy Swiss-Prot
Match: CBBYC_RALEH (Protein cbbY, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17
Identity = 55/139 (39.57%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  283 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAGTAIVSFLLGPE 699
            AL+FD DG L DTE   H  +FN  F E  L   WD  LY  LLK+ GGKER+  Y+     PE+A   +   K+ I ++H  KT  +   +    LPLRPG+A+LID+A E G+ +A+ +T+      A++   LG +
Sbjct:    3 ALIFDVDGTLADTES-AHLQAFNAAFAEVGLDWYWDAPLYTRLLKVAGGKERLMHYWRMVD-PEEARGCKV--KETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGAD 137          
BLAST of EY665549 vs. ExPASy Swiss-Prot
Match: CBBYP_RALEH (Protein cbbY, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.886e-16
Identity = 54/139 (38.85%), Postives = 77/139 (55.40%), Query Frame = 1
Query:  283 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAGTAIVSFLLGPE 699
            AL+FD DG L DTE   H  +FN  F E  L   WD  LY  LLK+ GGKER+  Y+     PE+A   +   K+ I ++H  KT  +   +    LPLRPG+A+LI +A E G+ +A+ +T+      A++   LG +
Sbjct:    3 ALIFDVDGTLADTET-AHLQAFNAAFAEVGLDWHWDAPLYTRLLKVAGGKERLMHYWRMVD-PEEARGCKV--KETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGAD 137          
The following BLAST results are available for this feature:
BLAST of EY665549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CBBY_RHOCA2.796e-1735.67Protein cbbY OS=Rhodobacter capsulatus GN=cbbY PE=... [more]
CBBY_RHOSH6.228e-1737.34Protein cbbY OS=Rhodobacter sphaeroides GN=cbbY PE... [more]
CBBYC_RALEH6.228e-1739.57Protein cbbY, chromosomal OS=Ralstonia eutropha (s... [more]
CBBYP_RALEH6.886e-1638.85Protein cbbY, plasmid OS=Ralstonia eutropha (strai... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665549 ID=EY665549; Name=EY665549; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGCACGAACAAGAAATTCCACAGAGGTCTGCTAAAACCAAT
GGCATCAACAACTTTCTCTCTTTCGTTGTCTACACTTGCTTCCTCAACAG
CTTATAACTCTGGCAATCACATTCCAACTATTAGCTGCAAAAGTAATGAG
AAGAGTAGCTTATGCTTATCGTCGTCTTCCTTTTTGGGTTCAAAATTAAA
TGTTAGCAGACGTACAAGTAGTGCGAATCCTATGAGCATGAGAAATGTTA
GAGTCACTTGCTCGGCATCTGTTCTTCCCTCGGCCCTTCTATTTGACTGC
GATGGCGTGCTCGTTGATACCGAGAAGGATGGCCACAGGATTTCTTTCAA
CGACACTTTCAAAGAAAAAGAATTAGGTGTTACCTGGGATGTGGATTTGT
ACGGCGAGTTGCTTAAAATTGGAGGTGGAAAAGAAAGGATGACAGCCTAC
TTCAACAAGACTGGTTGGCCAGAAAAGGCACCATCCGATGAAGAAGAAAG
AAAGCAATTCATTGCTTCTCTTCACAAGCGGAAGACAGAGTTGTTCATGG
TCCTTATTGAAAAAAAGTTGCTACCTCTTCGGCCTGGTGTGGCAAAGCTA
ATCGATCAGGCTCTGGAGAAGGGAGTCAAAGTTGCTGTATGTAGCACCTC
CAATGAGAAGGCGGGAACTGCGATAGTTTCTTTCTTGCTGGGACCAGAGC
GAGCTGAAAAAATTCAGATATTTGCTGGAGATGTCGTTTCCCCGCAAAAA
GCCTGAATCCGGCATTTATACATTAGCTGCTAGCACACTGGGGTGTTGAT
CCTTCAACCTGTGTTGGGGGTGAAGAAAGGGCCCCT
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