EY665539

Overview
NameEY665539
Unique NameEY665539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665539 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.061e-41
Identity = 73/178 (41.01%), Postives = 114/178 (64.04%), Query Frame = 1 
Query:   58 AFSTAILAVACAW-WMLLNWVWLKPKKLEKFLREQGFSGNSYKVFHGDMKELAQTTKEAKSRPISLSDDIARRILPFHHHIITNFGKNSFIWMGPRPNINITDPKMIREIFLKHDIFKK---LRSPLAKLLITGMVGYDGEQWF*VRKIATPAFHHDKLKNMLPYIHKSCNDMLRKWE 579
            A +  I A+  AW W +L+W W  PK++EK LR+QGF GN Y+   GD+KE  +  +EA S+P+  ++DI  R++P  +H I  +G+NSF WMG  P I++ +P++I+E+      ++K   + +PL K L+TG+  ++G +W   R+I +PAF  +KLK+MLP      +DML KWE
Sbjct:   11 AIAATIFALVMAWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSKPMEFNNDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAFAICYHDMLTKWE 188

HSP 2 Score: 33.4982 bits (75), Expect = 5.061e-41
Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = 3 
Query:  591 KDESCELDVWPHIPTLTAEVILQTAFGSNLKKEEQYLKALSETINL 728
            K  S E+D++P    LT++VI + AFGS  ++  +  + L E ++L
Sbjct:  193 KQGSHEVDIFPTFDVLTSDVISKVAFGSTYEEGGKIFRLLKELMDL 238
The following BLAST results are available for this feature:
BLAST of EY665539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO5.061e-4141.01Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665539 ID=EY665539; Name=EY665539; organism=Citrus sinensis; type=EST; length=927bp
CCACGCGTCCGTTCAATGAAAATGGAGACTGCACTTTGGACTGTGCCTTT
CTCCATTGCTTTCTCTACAGCTATTCTAGCCGTAGCATGTGCCTGGTGGA
TGCTACTGAATTGGGTATGGCTAAAGCCAAAGAAGCTAGAAAAGTTCCTC
AGAGAGCAAGGATTCTCCGGAAACTCCTACAAAGTATTTCATGGGGACAT
GAAAGAGCTTGCGCAGACCACTAAAGAAGCTAAAAGCAGACCCATCAGCC
TCTCCGACGATATCGCCCGGCGAATTCTGCCTTTCCACCATCATATCATC
ACCAATTTTGGCAAGAATTCTTTCATATGGATGGGTCCAAGACCAAACAT
AAACATCACAGACCCTAAGATGATAAGGGAAATCTTTTTGAAGCATGATA
TCTTTAAAAAGCTGAGAAGCCCACTTGCGAAGTTGCTGATCACTGGGATG
GTAGGCTATGATGGTGAACAGTGGTTTTAAGTTAGAAAAATCGCCACTCC
AGCTTTCCATCATGATAAATTGAAGAATATGTTACCTTACATTCATAAGA
GCTGTAACGACATGCTAAGGAAATGGGAGATGTCGTTTTCAAGGATGAGT
CCTGTGAGTTAGATGTGTGGCCTCATATTCCAACTTTGACAGCGGAAGTG
ATTCTCCAAACAGCATTCGGCAGTAACTTGAAAAAAGAAGAACAATATTT
GAAGGCCCTAAGCGAAACAATTAATCTTGGGAATTCCAGCGTTCTTTGTT
GGCCTAAATTCCCAGAGAGGAAGGTTTGGGCCTAAATAACCTGGACCAGA
AAATGGAGCGCGAACCCCCAATGAAATGGGGAAGAACCGGGGAAACGGTT
ATCCTTAACAAAACAGAGGGGAACTTCGGGAAATTCGGGAAGAGCCGCCA
GTAAGGAGGGCCTGAGTGGGGTAAATG
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