EY665538

Overview
NameEY665538
Unique NameEY665538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665538_ssr109 microsatellite EY665538_ssr109:109..126. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.321e-18
Identity = 39/136 (28.68%), Postives = 68/136 (50.00%), Query Frame = 1
Query:  142 TDQQALLALKDHITYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNI 549
            TD+QALL  K  ++ D   +L+ +W  +  +C W G+TC   + RV  L++ +  L G I P                   G++P  +  +  +++LD   N L G +   ++N S +L++RL +NRL G +P  +
Sbjct:   24 TDRQALLQFKSQVSEDKRVVLS-SWNHSFPLCNWKGVTCGRKNKRVTHLELGRLQLGGVISPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLDMGINYLRGPIPLGLYNCSRLLNLRLDSNRLGGSVPSEL 158          

HSP 2 Score: 34.2686 bits (77), Expect = 2.321e-18
Identity = 23/77 (29.87%), Postives = 34/77 (44.16%), Query Frame = 2
Query:  593 NMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKPPQNRYSFKTRRV*GQGMNNLS 823
            N + GK+P++L     L       NNL G IP +   L  +    L  N   G  PP   Y+  + ++ G G N+ S
Sbjct:  172 NNMRGKLPTSLGNLTLLEQLALSHNNLEGEIPSDVAQLTQIWSLQLVANNFSGVFPPA-LYNLSSLKLLGIGYNHFS 247          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.018e-14
Identity = 44/149 (29.53%), Postives = 66/149 (44.30%), Query Frame = 1
Query:  127 SSNITTDQQALLALKDHITYDPTNLLAHNWTS-NTSVCTWIGITCDV-------NSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNI 549
            S ++ +D Q LL LK+    D  N L HNW   + + C WIG+ C         NS  V +LD+S  NL G + P                   G +P  I     ++ +   +NQ  GS+   +  +S +    + NN+LSG LP+ I
Sbjct:   30 SESLNSDGQFLLELKNRGFQDSLNRL-HNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLRSFNICNNKLSGPLPEEI 177          

HSP 2 Score: 28.1054 bits (61), Expect = 1.018e-14
Identity = 19/57 (33.33%), Postives = 25/57 (43.86%), Query Frame = 2
Query:  590 KNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKP 760
            +N   G IP+ + KC  L       N + G +PKE   L  L+   L  NK  G  P
Sbjct:  214 QNDFSGNIPTEIGKCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIP 270          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.717e-14
Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 1
Query:  151 QALLALKDHITYDPTNLLAHNWTSNTSV--CTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNIC 552
            +AL + K+ I+ DP  +L+ +WT   S+  C W GITCD   H V ++ + +  L+G + P                   G +P  I  +  +  L    N  SGS+ S ++ + +I  + L NN LSG++P+ IC
Sbjct:   32 EALKSFKNGISNDPLGVLS-DWTIIGSLRHCNWTGITCDSTGHVV-SVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDLRNNLLSGDVPEEIC 165          

HSP 2 Score: 31.9574 bits (71), Expect = 1.717e-14
Identity = 22/58 (37.93%), Postives = 26/58 (44.83%), Query Frame = 2
Query:  587 DKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKP 760
            D N L GKIP  L     L       N+L G+IP     L  L   DL  N+L G+ P
Sbjct:  176 DYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIP 233          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.240e-14
Identity = 39/149 (26.17%), Postives = 71/149 (47.65%), Query Frame = 1
Query:  127 SSNITTDQQALLALKDHITYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNICNNLPYLK 573
            +S +  + +AL+A+K   +     LL  +   N+ +C+W G+ CD  S+ V +L++S  NL G I P                   G +P  I    ++ +LD ++N L G +   +  +  +  + L NN+L+G +P  +   +P LK
Sbjct:   23 ASAMNNEGKALMAIKGSFSNLVNMLLDWDDVHNSDLCSWRGVFCDNVSYSVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLAGQIPDEIGNCASLVYLDLSENLLYGDIPFSISKLKQLETLNLKNNQLTGPVPATL-TQIPNLK 170          

HSP 2 Score: 31.187 bits (69), Expect = 2.240e-14
Identity = 20/61 (32.79%), Postives = 31/61 (50.82%), Query Frame = 2
Query:  578 LFLDKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKP 760
            L L  NML G + S + +   L + + + NNL G IP+   N    +  D+  N++ GE P
Sbjct:  196 LGLRGNMLTGTLSSDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFQILDISYNQITGEIP 256          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.896e-14
Identity = 37/146 (25.34%), Postives = 75/146 (51.37%), Query Frame = 1
Query:  133 NITTDQQALLALKDHITYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNICNNLPYL 570
            +++++  +L++ K  +  +P+ L + N +S+ S C W+G+TC +   RV +L +   +L+G IP +                  G +P  I+ +  ++ LD + N L+G +   +  +  +L + L++N  SG LP +   +LP L
Sbjct:   22 DLSSETTSLISFKRSLE-NPSLLSSWNVSSSASHCDWVGVTCLLG--RVNSLSLPSLSLRGQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLSDNHFSGSLPPSFFISLPAL 164          

HSP 2 Score: 31.187 bits (69), Expect = 2.896e-14
Identity = 16/48 (33.33%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  575 ALFLDKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLK 718
            +L +  N L G+IP  + K   L++     N+  G IP E  N+ +LK
Sbjct:  166 SLDVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQIPSEIGNISLLK 213          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 8.236e-14
Identity = 31/91 (34.07%), Postives = 48/91 (52.75%), Query Frame = 1
Query:  286 LDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNICNN 558
            L+++  +L G IP Q                  G +P S+  +  ++ LD + N L+G +    +NMS +LD+ L NN LSG LPK+IC+N
Sbjct:  244 LNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSN 334          

HSP 2 Score: 35.039 bits (79), Expect = 8.236e-14
Identity = 23/62 (37.10%), Postives = 30/62 (48.39%), Query Frame = 2
Query:  578 LFLDKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKPP 763
            L L    L G+IP  LSKC+ L   +  +N+L G+IP+    L  L    L  N L G   P
Sbjct:  341 LVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSP 402          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.073e-13
Identity = 33/150 (22.00%), Postives = 74/150 (49.33%), Query Frame = 1
Query:  136 ITTDQQALLALKDHITYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNICNNLPYLKGPFF 585
            + +D  ALL+L  H T  P+++      S+++ C+W+G+ CD     V  L++S + + G   P+                  GS+P+ +     ++ +D + N  +G++   +  + ++ ++ L  N L G  P+++  ++P+L+  +F
Sbjct:   24 LNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECD-RRQFVDTLNLSSYGISGEFGPEISHLKHLKKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLL-SIPHLETVYF 171          

HSP 2 Score: 34.6538 bits (78), Expect = 1.073e-13
Identity = 22/61 (36.07%), Postives = 27/61 (44.26%), Query Frame = 2
Query:  578 LFLDKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKP 760
            L+LD N   G +PS+L     L       NNL G +P    NL  L   D+  N L G  P
Sbjct:  193 LWLDDNQFSGPVPSSLGNITTLQELYLNDNNLVGTLPVTLNNLENLVYLDVRNNSLVGAIP 253          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.354e-13
Identity = 41/163 (25.15%), Postives = 72/163 (44.17%), Query Frame = 1
Query:  127 SSNITTDQQALLALKDHITYDPTNLLAHNWTSNTSV----CTWIGITC---------DVN-SHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNICNNLPYLK 573
            S N+T +   L AL+  +    +++    W  ++S     C W+GI+C         DVN S RV  L++ +  L G +                     GS+  S+  +  ++ LD + N  SG   S + N+ S+  + +  N   G +P ++CNNLP ++
Sbjct:   24 SQNLTCNSNDLKALEGFMRGLESSIDGWKWNESSSFSSNCCDWVGISCKSSVSLGLDDVNESGRVVELELGRRKLSGKLSESVAKLDQLKVLNLTHNSLSGSIAASLLNLSNLEVLDLSSNDFSGLFPSLI-NLPSLRVLNVYENSFHGLIPASLCNNLPRIR 185          

HSP 2 Score: 34.2686 bits (77), Expect = 2.354e-13
Identity = 20/56 (35.71%), Postives = 26/56 (46.43%), Query Frame = 2
Query:  584 LDKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHG 751
            L  N   G IP  +  C  + +    SNNL G+IP+E   L  L    L  N+L G
Sbjct:  189 LAMNYFDGSIPVGIGNCSSVEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSG 244          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13
Identity = 40/143 (27.97%), Postives = 71/143 (49.65%), Query Frame = 1
Query:  127 SSNITTDQQALLALKDHITYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNICN 555
            SS + +D   L+  K  +  DP +LL      + S C+W GI+C+ N  +V  L +    L G+IP                    G +P S +    ++FLD + N +SG + S + ++ ++L + L++N L+G+LP N+ +
Sbjct:   19 SSALNSDGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGISCN-NDSKVLTLSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKLPTNLAS 160          
BLAST of EY665538 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.156e-12
Identity = 35/143 (24.48%), Postives = 67/143 (46.85%), Query Frame = 1
Query:  130 SNITTDQQALLALKDHITYDPTNLLAHNWTSNTSV---CTWIGITCDVNSHRVRALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGSVPTSIYTMHTIKFLDFTDNQLSGSVSSFVFNMSSILDIRLTNNRLSGELPKNI 549
            S + +D   LL+L  H+   P  + +  W  N S    C W GITCD +S  V +L+ ++  + G + P+                  G++P+++     +  LD ++N  S  +   + ++  +  + L  N L+GELP+++
Sbjct:   27 SCLNSDGLTLLSLLKHLDRVPPQVTS-TWKINASEATPCNWFGITCD-DSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYLYINFLTGELPESL 167          

HSP 2 Score: 36.5798 bits (83), Expect = 4.156e-12
Identity = 22/63 (34.92%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  572 KALFLDKNMLHGKIPSALSKCKQLAH*NWQSNNLPGAIPKENRNLGMLKGKDLG*NKLHGEKP 760
            + L+LD N L G IP ++   K+L   +  +N   G IP+   N   L+   L  NKL G  P
Sbjct:  174 QVLYLDYNNLTGPIPQSIGDAKELVELSMYANQFSGNIPESIGNSSSLQILYLHRNKLVGSLP 236          
The following BLAST results are available for this feature:
BLAST of EY665538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
Y3475_ARATH2.321e-1828.68Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH1.018e-1429.53Probable leucine-rich repeat receptor-like protein... [more]
FLS2_ARATH1.717e-1430.15LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH2.240e-1426.17LRR receptor-like serine/threonine-protein kinase ... [more]
EXS_ARATH2.896e-1425.34Leucine-rich repeat receptor protein kinase EXS OS... [more]
GSO1_ARATH8.236e-1434.07LRR receptor-like serine/threonine-protein kinase ... [more]
RPK1_IPONI1.073e-1322.00Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
PSKR1_DAUCA2.354e-1325.15Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y4372_ARATH4.722e-1327.97Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH4.156e-1224.48Leucine-rich repeat receptor-like protein kinase P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665538 ID=EY665538; Name=EY665538; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCCAGTAACAAACAAAGCAATGTTTCATGGAGAGAAACCT
TAGTCTCAGTATGATCATTGTGTCATTAACCCACTGCGTGCTTCTTTGCT
TGGTTGTTGCAGCAGCAGCAGCAGCAAGCAGCAATATTACCACAGACCAA
CAAGCTCTTCTTGCCCTGAAAGATCATATAACTTATGATCCGACCAACCT
TCTTGCCCATAATTGGACCTCGAATACCTCTGTTTGTACCTGGATTGGCA
TCACTTGTGATGTCAATAGCCATAGAGTCAGAGCCTTAGATATTTCTCAA
TTCAATCTACAAGGCACCATCCCTCCTCAACTTGGAAACCTCTCTTCACT
CACAACACTTAATCTTAGTCATAACAAGCTTTCCGGAAGCGTTCCCACCT
CCATCTACACCATGCATACGATAAAATTTCTTGACTTCACTGATAACCAG
CTCTCTGGTTCAGTTTCTTCCTTCGTCTTCAACATGTCTTCAATATTAGA
CATTCGTTTGACCAATAACAGACTTTCTGGTGAGCTTCCGAAAAATATTT
GCAACAATCTTCCTTATTTGAAAGGCCCTTTTTTTGGACAAAAACATGTT
GCATGGCAAAATTCCTTCTGCTTTATCAAAGTGCAAACAACTGGCACATT
AAAATTGGCAGTCCAATAATTTACCCGGTGCCATACCAAAGGAAAATCGG
AACTTGGGCATGCTCAAAGGGAAAGACCTCGGCTAAAACAAACTTCACGG
GGAAAAACCCCCACAAAATCGCTATTCTTTCAAAACTAGAAGGGTTTAGG
GGCAAGGAATGAACAACCTAAGTTGGGGGGGGGATCGCCATATAACCTTC
ACCTGGTCCTCGCTGGAAGGACATTAATCCCCCACAAAAACCCCCGCCCG
GGGAA
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