FC871887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT21_ORYSJ (Ammonium transporter 2 member 1 OS=Oryza sativa subsp. japonica GN=AMT2-1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.777e-34 Identity = 62/90 (68.89%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPESTHEVDGQTVTTEPFYAMATLVYFQFTFAA 462 KKKWAVNSAFM LYA+A+ L+ WVLV +RMAFGDQLLPFWGK AL Q YLVGRA LP + H G TEPFY ATLV FQF FAA Sbjct: 50 KKKWAVNSAFMALYAYASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH---GAIPRTEPFYPEATLVLFQFEFAA 136 HSP 2 Score: 43.8986 bits (102), Expect = 3.777e-34 Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 3 Query: 96 IKKSDNA*KMTASTLVRIQNMPGLLIIYTSIKQEK 200 + K DNA ++TASTLV IQ+MPGL+++Y SI ++K Sbjct: 18 LNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKK 52
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT32_ORYSJ (Ammonium transporter 3 member 2 OS=Oryza sativa subsp. japonica GN=AMT3-2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.359e-30 Identity = 60/93 (64.52%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPESTH-EVDG--QTVTTEPFYAMATLVYFQFTFAA 462 KKKWAVNSAFM LYAFAAV ICWV Y M+FG++LLP WGK PAL Q LVGRA LP + H DG +T EP Y MAT+VYFQ FAA Sbjct: 56 KKKWAVNSAFMALYAFAAVWICWVTWAYNMSFGEKLLPIWGKARPALDQGLLVGRAALPATVHYRADGSVETAAVEPLYPMATVVYFQCVFAA 148 HSP 2 Score: 35.4242 bits (80), Expect = 1.359e-30 Identity = 13/35 (37.14%), Postives = 27/35 (77.14%), Query Frame = 3 Query: 96 IKKSDNA*KMTASTLVRIQNMPGLLIIYTSIKQEK 200 + K DNA ++ A+T+V +Q++PGL+++Y + ++K Sbjct: 24 LNKGDNAWQLVAATVVGLQSVPGLVVLYGGVVKKK 58
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT22_ORYSJ (Ammonium transporter 2 member 2 OS=Oryza sativa subsp. japonica GN=AMT2-2 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.903e-30 Identity = 60/93 (64.52%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPESTH-EVDG--QTVTTEPFYAMATLVYFQFTFAA 462 KKKWAVNSAFM LYA+A+ LI WVLV +RMAFGD+LLPFW K PAL Q +LV RA P + H DG +T TEPFYA A LV F+F FAA Sbjct: 57 KKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWAKAGPALTQDFLVQRAVFPATAHYGSDGTLETPRTEPFYAEAALVLFEFEFAA 149 HSP 2 Score: 37.7354 bits (86), Expect = 3.903e-30 Identity = 17/35 (48.57%), Postives = 26/35 (74.29%), Query Frame = 3 Query: 96 IKKSDNA*KMTASTLVRIQNMPGLLIIYTSIKQEK 200 + K D A ++ A+T V IQ+MPGL++IY SI ++K Sbjct: 25 LNKGDTAWQLVAATFVGIQSMPGLVVIYGSIVKKK 59
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT2_ARATH (Ammonium transporter 2 OS=Arabidopsis thaliana GN=AMT2 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 7.267e-30 Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPESTHEVDGQTVTTEPFYAMATLVYFQFTFAA 462 KKKWAVNSAFM LYAFAAVL+CWVL+CY+MAFG++LLPFWGKG PA Q YL G+A++P S P++ MATLVYFQFTFAA Sbjct: 48 KKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSN--------VAAPYFPMATLVYFQFTFAA 129
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT23_ORYSJ (Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.295e-27 Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPESTH-EVDG--QTVTTEPFYAMATLVYFQFTFAA 462 KKKWAVNSAFM LYA+A+ LI WVLV +RMAFGD+LLPFWGK AL + +LV RA +P + H DG ++ TEPFY A++V FQF AA Sbjct: 53 KKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWGKAGAALTEGFLVARASVPATAHYGKDGALESPRTEPFYPEASMVLFQFELAA 145 HSP 2 Score: 34.6538 bits (78), Expect = 1.295e-27 Identity = 14/35 (40.00%), Postives = 25/35 (71.43%), Query Frame = 3 Query: 96 IKKSDNA*KMTASTLVRIQNMPGLLIIYTSIKQEK 200 + DN ++ A+T V +Q+MPGL+++Y SI ++K Sbjct: 21 LNTGDNGWQLAAATFVGLQSMPGLVVLYGSIVKKK 55
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT31_ORYSJ (Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.201e-24 Identity = 56/98 (57.14%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPESTHEVDG--------QTVTTEPFYAMATLVYFQFTFAA 462 KKKWAVNSAFM LYAFAAV +CWV Y M+FG +LLPFWGK PALGQ +L+ +A LP++T G +T P Y MAT+VYFQ FAA Sbjct: 55 KKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAA 152
BLAST of FC871887 vs. ExPASy Swiss-Prot
Match: AMT33_ORYSJ (Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica GN=AMT3-3 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.675e-24 Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 193 KKKWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARLPEST---HEVDGQTVTTEPFYAMATLVYFQFTFAA 462 KKKWA+NSAFM LYAFAAV ICWV+ Y M+FGD+LLPFWGK PALGQ +LV ++ L + H + +P Y +AT+VYFQ FA+ Sbjct: 52 KKKWAINSAFMALYAFAAVWICWVVWAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFAS 144 The following BLAST results are available for this feature:
BLAST of FC871887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871887 ID=FC871887; Name=FC871887; organism=Citrus sinensis; type=EST; length=464bpback to top |