EY665508

Overview
NameEY665508
Unique NameEY665508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: ALB31_ARATH (ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 8.050e-72
Identity = 144/234 (61.54%), Postives = 168/234 (71.79%), Query Frame = 1
Query:   88 MATSLSIHQ-NLILSPFPNRTDIQTPLFTRTHFGQKPFLRGS---ICVAKFGLRPDPNSADGVKELLGVAERLLFTLXXXXXXXXXXXXXXK-------QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            M++++S+   +LILS F     +Q   F R+ F   P    S     VA+ G RPD  S D +K+    AE LL+T+                      Q++DW SGI N MET+LKVLKDG+ST+HVPY+YGFAIILLTV+V AATFPLTKKQVES+MAM+SL PQ+KAIQERYAGDQE+I LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV DEGLLTEGFFWI
Sbjct:    1 MSSTISLKPTHLILSSFSTGKVLQ---FRRSRFSHTPSSSSSRYRTLVAQLGFRPD--SFDFIKDH---AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWI 226          

HSP 2 Score: 38.5058 bits (88), Expect = 8.050e-72
Identity = 19/36 (52.78%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  759 SLTWPTTIAARQMGVASLGLFPFEKGHSPPGRAETV 866
            SL  PTT+AARQ G     LFPF +GH P G  +T+
Sbjct:  228 SLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTL 263          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: ALB3_ARATH (Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 6.552e-59
Identity = 99/136 (72.79%), Postives = 122/136 (89.71%), Query Frame = 1
Query:  349 KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            +++  W   I++ ME VLK+LKDG+S +HVPYAYGFAIILLT+IV AAT+PLTK+QVES++AM++L P++KAIQ+RYAG+QERI LET+RLYK AG+NPLAGCLPTLATIPVWIGLY+ALSNV +EGL TEGFFWI
Sbjct:  107 QKSGGWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWI 242          

HSP 2 Score: 37.3502 bits (85), Expect = 6.552e-59
Identity = 20/36 (55.56%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  759 SLTWPTTIAARQMGVASLGLFPFEKGHSPPGRAETV 866
            SL  PT+IAARQ G     LFPF  GH P G  +TV
Sbjct:  244 SLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTV 279          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: PPF1_PEA (Inner membrane protein PPF-1, chloroplastic OS=Pisum sativum GN=PPF-1 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 5.955e-57
Identity = 120/213 (56.34%), Postives = 144/213 (67.61%), Query Frame = 1
Query:  136 PNRTDIQTPLFTRTHFGQKPFLRGSICVAKFGLRPDPNSADGVKELLGV---AERLLFTLXXXXXXXXXXXXXX---KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            PNRT     LFT+  F              F   P   S     +L G+   AE LL+TL                 ++N  W   I++ ME VLKVLKDG+S++HVPY+YGFAIILLTVIV AAT PLTK+QVES++AM++L P++KAIQERYAG+QERI LET+RLY  AG+NPLAGCLPTLATIPVWIGLY+ALSNV +EGLLTEGF WI
Sbjct:   25 PNRTR----LFTKVQFS-------------FHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWI 220          

HSP 2 Score: 31.9574 bits (71), Expect = 5.955e-57
Identity = 18/35 (51.43%), Postives = 20/35 (57.14%), Query Frame = 3
Query:  759 SLTWPTTIAARQMGVASLGLFPFEKGHSPPGRAET 863
            SL  PT+IAARQ G     LFPF  GH   G  +T
Sbjct:  222 SLGGPTSIAARQSGSGISWLFPFVDGHPLLGWYDT 256          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: ALB32_CHLRE (Inner membrane ALBINO3-like protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.2 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.401e-41
Identity = 90/167 (53.89%), Postives = 114/167 (68.26%), Query Frame = 1
Query:  376 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWIXXXXXXXXXXXDRWEWHLLAFSLLKKGIPPLEGQKRFAYL 876
            +    E VL+ L +G+ +  +PY+YGFAII LTV+V  ATFPLT+KQVES++++++L P+VK +Q +YA D E + LETARLYK AG+NPLAGC PTLATIPV+IGLY ALSN   EGLLTEGFFWI              EW L+ F   + G PP+      AYL
Sbjct:   77 LAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGGPTTIGGG-LEW-LVPF---ENGAPPVGWANAAAYL 238          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: ALB31_CHLRE (Inner membrane ALBINO3-like protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.955e-37
Identity = 78/178 (43.82%), Postives = 121/178 (67.98%), Query Frame = 1
Query:  364 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLL-TEGFFWIXXXXXXXXXXXDR------WEWHLLAFSLLKKGIPPLEGQKRFAYL 876
            W++ + + +E VL  L++G+  LHVPY+YG++IILLT+IV   T+PLTK+QVES+MA+++L P++  I++R+  D+++I  ET+ LY+ AG+NPLAGCLPTLATIP++IGL+ +L+NV ++GLL T+GF+++            +      W W      L   G PP+  +   AYL
Sbjct:  113 WVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLW-----PLGPDGAPPIGWEDAAAYL 285          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: OXAA_ANADF (Inner membrane protein oxaA OS=Anaeromyxobacter sp. (strain Fw109-5) GN=oxaA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.143e-17
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  448 YGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            +G AIILLTV+V    +PLT K ++S   MR L P+++ ++ ++  D+E++ L T +LY+   +NPL GCLP L  +P+W  LY  L    +  L  E F WI
Sbjct:  358 WGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNLATMQLYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVE--LYREPFLWI 458          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: OXAA_ANASK (Inner membrane protein oxaA OS=Anaeromyxobacter sp. (strain K) GN=oxaA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  448 YGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            +G AIILLTV+V    FPLT K ++S   MR L P+++ ++ ++  D+E++ L   +LY+   +NPL GCLP L  +PVW  LY AL    +  L  E F W+
Sbjct:  356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNLAVMQLYQKHKVNPLGGCLPMLLQMPVWFALYAALQTSVE--LYREPFLWM 456          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: OXAA_ANADE (Inner membrane protein oxaA OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=oxaA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  448 YGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            +G AIILLTV+V    FPLT K ++S   MR L P+++ ++ ++  D+E++ L   +LY+   +NPL GCLP L  +PVW  LY AL    +  L  E F W+
Sbjct:  355 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNLAVMQLYQKHKVNPLGGCLPMLLQMPVWFALYAALQTSVE--LYREPFLWM 455          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: OXAA_ANAD2 (Inner membrane protein oxaA OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=oxaA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  448 YGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVGDEGLLTEGFFWI 756
            +G AIILLTV+V    FPLT K ++S   MR L P+++ ++ ++  D+E++ L   +LY+   +NPL GCLP L  +PVW  LY AL    +  L  E F W+
Sbjct:  356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNLAVMQLYQKHKVNPLGGCLPMLLQMPVWFALYAALQTSVE--LYREPFLWM 456          
BLAST of EY665508 vs. ExPASy Swiss-Prot
Match: OXAA_WOLSU (Inner membrane protein oxaA OS=Wolinella succinogenes GN=oxaA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  448 YGFAIILLTVIVXAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIXLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 714
            +G+AI+LLT++V    FPLT K + S   ++ +AP++K IQE+Y GD +++ +    LYK  G NP+ GCLP L  +P++  +YR L N
Sbjct:  339 WGWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKGDPQKLQVHMMELYKKHGANPMGGCLPLLLQMPIFFAIYRVLYN 427          
The following BLAST results are available for this feature:
BLAST of EY665508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 366
Match NameE-valueIdentityDescription
ALB31_ARATH8.050e-7261.54ALBINO3-like protein 1, chloroplastic OS=Arabidops... [more]
ALB3_ARATH6.552e-5972.79Inner membrane protein ALBINO3, chloroplastic OS=A... [more]
PPF1_PEA5.955e-5756.34Inner membrane protein PPF-1, chloroplastic OS=Pis... [more]
ALB32_CHLRE1.401e-4153.89Inner membrane ALBINO3-like protein 2, chloroplast... [more]
ALB31_CHLRE7.955e-3743.82Inner membrane ALBINO3-like protein 1, chloroplast... [more]
OXAA_ANADF3.143e-1740.78Inner membrane protein oxaA OS=Anaeromyxobacter sp... [more]
OXAA_ANASK9.144e-1741.75Inner membrane protein oxaA OS=Anaeromyxobacter sp... [more]
OXAA_ANADE9.144e-1741.75Inner membrane protein oxaA OS=Anaeromyxobacter de... [more]
OXAA_ANAD29.144e-1741.75Inner membrane protein oxaA OS=Anaeromyxobacter de... [more]
OXAA_WOLSU1.560e-1642.70Inner membrane protein oxaA OS=Wolinella succinoge... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665508 ID=EY665508; Name=EY665508; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGCTTCAACTAATAAAAGCCCTAATCAAGCCAAATTCTAGG
GTTGTACGAACCCCCCAAAAAAAAATTGAATTTAATCATGGCTACTTCCC
TCTCAATTCATCAAAATCTTATACTCTCCCCGTTTCCGAACCGAACCGAT
ATTCAAACCCCACTGTTTACCCGAACTCACTTTGGTCAAAAACCTTTCCT
CCGCGGGTCAATTTGTGTGGCCAAGTTCGGACTCAGACCCGACCCGAATT
CCGCGGATGGTGTTAAGGAGCTGCTTGGCGTAGCTGAGAGGTTGCTTTTT
ACTCTAGCAGATGCTGCCGTGTCTTCTTCCGACGCAGTAACTACTACCAA
ACAGAACTCTGATTGGCTTTCTGGTATCACTAATGTAATGGAGACTGTCT
TGAAGGTTTTAAAAGATGGGATGTCTACTTTACATGTACCTTATGCTTAT
GGGTTCGCTATTATACTTCTCACCGTAATTGTTANAGCTGCTACTTTCCC
TTTGACTAAGAAACAGGTTGAATCCTCTATGGCTATGCGGTCTTTGGCAC
CTCAAGTCAAGGCTATTCAGGAAAGATATGCAGGGGATCAGGAGAGAATT
CNACTCGAAACTGCTCGATTGTATAAATTAGCTGGCATAAATCCTCTAGC
AGGATGTCTGCCTACCCTTGCAACAATACCGGTATGGATTGGCCTATATA
GAGCCCTTTCAAATGTGGGAGATGAGGGACTTCTCACAGAAGGCTTCTTT
TGGATACCTCCCTAACCTGGCCCACTACCATTGCTGCTCGACAGATGGGA
GTGGCATCTCTTGGCCTTTTCCCTTTTGAAAAAGGGCATTCCCCCCCTGG
AAGGGCAGAAACGGTTTGCATACCTTGGTCCTGGCCCGGGGCACCGGGTT
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