FC871886

Overview
NameFC871886
Unique NameFC871886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5917 contig Csv1_Contig5917:445..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871886 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.485e-72
Identity = 137/174 (78.74%), Postives = 153/174 (87.93%), Query Frame = 1 
Query:    1 EILFDCSENIDLMMYAYGYSIEHILMVDIIPDPAVRKAMNEINAAQRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLPHGPGHVRDISDQIRNGLMEASAAQVDG*VIFTRYC 522
            E+     E ++ +M  YGY+IEHILMVDIIPD +VR+AMNEINAAQR+QLAS+YKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEG SAKEVMDLIMITQYFDTIKDLGNSS NTTVF+PHGPGHVRDI +QIRNGLME++ A ++      R+C
Sbjct:   12 EVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESARAGIN----IERFC 181
The following BLAST results are available for this feature:
BLAST of FC871886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO4.485e-7278.74Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1DG06FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871886 ID=FC871886; Name=FC871886; organism=Citrus sinensis; type=EST; length=660bp
GAAATTTTATTTGATTGCTCGGAGAATATCGATCTGATGATGTATGCCTA
TGGATATAGCATTGAGCACATATTGATGGTAGACATTATACCTGATCCTG
CTGTGCGCAAGGCAATGAATGAGATCAATGCGGCTCAAAGGCTTCAGCTT
GCTAGTGTATACAAAGGGGAAGCTGAGAAGATTCTCCAAGTTAAAAGAGC
AGAAGCTGAAGCTGAAGCCAAGTACCTTGGTGGCGTAGGTGTGGCCAGGC
AACGGCAGGCAATAACAGATGGTTTGCGAGAGAACATTTTGAACTTCTCT
CATAAGGTAGAAGGCGCCTCAGCTAAGGAGGTTATGGATCTCATCATGAT
CACTCAGTACTTTGACACGATCAAGGACCTTGGGAACTCATCAAATAACA
CAACTGTCTTTCTACCCCATGGTCCTGGTCATGTTCGGGATATCAGCGAT
CAGATACGCAACGGGCTGATGGAGGCATCTGCTGCTCAAGTAGATGGTTG
AGTGATTTTTACCCGCTATTGTCAATACTAGTTCTTTCTACAGCATATGA
TTGCTTAAGCTACATTGAATTTACAGAGATGCTAATAATATAGGATGGTA
TTCATACTTCGATGTATAGTTGTTTTTCCCTGCTGCCAAGAGCTACGAAT
AAACAGGATT
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