EY665501

Overview
NameEY665501
Unique NameEY665501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665501_ssr154 microsatellite EY665501_ssr154:154..165. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY665501 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31
Identity = 76/133 (57.14%), Postives = 83/133 (62.41%), Query Frame = 2 
Query:   95 MGCCESTFLGGH-LSVDTKXXXXXXXXXXXXPTQPSNGTEXXXXXXXXXXXXXX---FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH 481
            MGCC+S F G + L  D               T   NG                   F+EFS ADL+AATNNFSSD IVSESGEKAPN+VYKGRLQ    NRRWIAVKKFTK AWP+PKQFA+EAWGVGKLRH
Sbjct:    1 MGCCQSLFSGDNPLGKDGVQPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPEPKQFAEEAWGVGKLRH 129
[Close]
BLAST of EY665501 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.384e-22
Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 2 
Query:  254 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH 481
            F EFS+  +R AT+ F+++ IVSE GE+APNVVYKG+L    +N+R IAVK+F + +WPD +QF +EA  VG+LR+
Sbjct:   41 FREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKL----ENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRN 112

HSP 2 Score: 41.9726 bits (97), Expect = 3.384e-22
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 3 
Query:  486 RVANLIGYCCDGDERLLVAEYLAI*YFLLNLLFHWENPTIEW 611
            R+ANL+G C + +ERLL+AE++     L   LFHWE+  ++W
Sbjct:  114 RMANLLGCCYEDEERLLIAEFMPN-ETLAKHLFHWESQPMKW 154
[Close]
BLAST of EY665501 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  260 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHK 484
            +FS + L+ ATN+FS + IVS+   +  +VV+KGRLQ+G     ++A+K+F   AW DPK F +EA  VGKLRHK
Sbjct:   37 KFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGG----FVAIKRFNNMAWSDPKLFLEEAQRVGKLRHK 104
The following BLAST results are available for this feature:
BLAST of EY665501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y4523_ARATH6.026e-3157.14Probable serine/threonine-protein kinase At4g35230... [more]
Y5126_ARATH3.384e-2253.95Probable serine/threonine-protein kinase At5g41260... [more]
SSP_ARATH1.823e-1149.33Probable inactive receptor-like kinase SSP OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665501 ID=EY665501; Name=EY665501; organism=Citrus sinensis; type=EST; length=860bp
ACGAAAACAAACCAAACACCCCCTATTATTAGCTTCAGCTGCTGAGCTGG
GGGGTTTGGTCGGTTCATTTCTTCTGAGTCAACTCGGCCGAGTTATGGGC
TGTTGCGAATCAACCTTCTTAGGAGGACACCTCTCGGTTGATACCAAAAA
TCGCCACCACCACCAACAGAATCACCGCAATCATCCGACTCAGCCGTCTA
ATGGTACTGAGGGCTCAGGCGGACTCGCTGCCGGCTCAGATGGCGCGCCG
GCTTTCGCCGAGTTCTCCTTAGCCGACCTCAGAGCCGCTACGAATAACTT
CAGTTCTGATTTTATCGTATCCGAGAGCGGCGAAAAGGCTCCCAATGTCG
TCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGATCGCC
GTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTGCTGA
TGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAAGAGGGTGGCGAATTTA
ATTGGCTATTGTTGTGATGGGGATGAGAGATTGCTGGTGGCTGAATACCT
TGCCATATGATACTTTTTGCTAAACCTTTTATTTCACTGGGAAAATCCAA
CCATTGAGTGGGGCTATGCGGCTCAACAGTTGCTCCTGTATATTTGCTGA
ACCTTTAAAATTATTTGCCAATAATGAAAGGGACGTTCATTAATACAATG
AAATGAAATGGCCTTATAAGGGGCCTCTTTAGAACTAAAATGCGGGGAAC
CCTCGGCTTTTCCTGTTTTTGTGGCCTTGGCCGAAAAAACCAAAAAGCGG
AAAGGCCAAAAGCATTACCCCACCTTCCTTCGGAAACTTGCCCCCACTAT
ACAATCCATA
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