EY665491

Overview
NameEY665491
Unique NameEY665491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length454
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11916 contig Csv1_Contig11916:482..934. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665491 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 6.192e-23
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 3
Query:   12 LDVYEETLSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKKV 206
            LDVYE  LSK+ YLAGDF SLADL+HLPFT+YLVGP+ K ++I+DRKHVSAWWD IS+R +WK+V
Sbjct:  143 LDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of EY665491 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.690e-12
Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 3
Query:   12 LDVYEETLSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKKV 206
            LDVYE  L+ + YL GD F+LADLSH+P  +Y++       ++  R++++ WW++IS RP+WKK+
Sbjct:  144 LDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKL 208          
BLAST of EY665491 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 34/64 (53.12%), Postives = 38/64 (59.38%), Query Frame = 3
Query:   12 LDVYEETLSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKK 203
            LDVYE  L  S YL GD F+LADL H P   YL+G   K  +   R HVSAW  DI  RP+W K
Sbjct:  144 LDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSK 206          
BLAST of EY665491 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 3
Query:   12 LDVYEETLSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKKV 206
            LDVYE  L +S YLA D F+L DL  +P  QYL+G   K+ +  +R HVSAW  DI++RPS KKV
Sbjct:  145 LDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAKKV 208          
BLAST of EY665491 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11
Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3
Query:   12 LDVYEETLSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKKV 206
            LDVYE  L+KS +LAGD F+LADL HLP   YL+G  + + +   R  VS W   IS RP+W KV
Sbjct:  194 LDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLG-TDSKVLFDSRPKVSEWIKKISARPAWAKV 257          
BLAST of EY665491 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 3
Query:   12 LDVYEETLSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKKV 206
            LDVYE  L +S YLA D F+L DL  +P  QYL+G   K+ +  +R HVSAW  DI++RPS +KV
Sbjct:  144 LDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAQKV 207          
The following BLAST results are available for this feature:
BLAST of EY665491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GSTF3_ARATH6.192e-2372.31Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH1.690e-1244.62Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU5.437e-1153.13Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GST11_ARATH5.437e-1153.85Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF6_ARATH7.102e-1152.31Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_ARATH9.275e-1152.31Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665491 ID=EY665491; Name=EY665491; organism=Citrus sinensis; type=EST; length=454bp
GCACGCGTCCGCTCGATGTTTACGAGGAGACCCTTTCAAAGAGCAATTAT
TTGGCTGGTGATTTCTTCAGCCTGGCTGATCTGAGTCACCTTCCTTTTAC
TCAATACTTGGTTGGGCCGATGGAGAAGGAGTACATGATTAGAGACAGAA
AGCATGTGAGTGCTTGGTGGGATGATATTAGCAACAGGCCATCCTGGAAG
AAAGTCCTTGAGCTTTATTAGCTACTTTGGCTGAGCTTGATTTCATGTAA
TAATAATCGTGGGGCTTGTGTTTTTACTCCTGCCTCCTAGTTTGTTCATG
TGTTTGGCGATATGTATCTTTCTTGTGTCTTTTTGGTTTTAATAAATAAA
TGCTTGGGGCCTTGGAGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAANAAAAAAANA
GGGG
back to top