EY665489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.615e-84 Identity = 165/228 (72.37%), Postives = 186/228 (81.58%), Query Frame = 3 Query: 57 PLSFNGFGAATS-VPSSSFFGTSLKKVGSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 PLS NG GA S VPS++FFG+SLKK ++ P K S +FKI A E+ E++QT KD+WKGLAYD SDDQQDIT GKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SL NIK+PLILGIWGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA +IIKKGK C L I DL+ GG Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGG 239
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.615e-84 Identity = 165/228 (72.37%), Postives = 186/228 (81.58%), Query Frame = 3 Query: 57 PLSFNGFGAATS-VPSSSFFGTSLKKVGSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 PLS NG GA S VPS++FFG+SLKK ++ P K S +FKI A E+ E++QT KD+WKGLAYD SDDQQDIT GKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SL NIK+PLILGIWGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA +IIKKGK C L I DL+ GG Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGG 239
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.597e-84 Identity = 157/218 (72.02%), Postives = 180/218 (82.57%), Query Frame = 3 Query: 57 PLSFNGFGAATSVPSSSFFGTSLKKVGSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLE 710 P + NG ++ SVPSS+F G+SLKKV SR SKV S S +I A VDE+KQT KDRWKGLA+D SDDQQDIT GKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHITKNFM+L N+KVPLILGIWGG+GQ KSFQC LVFAKM I+PIMM+AG+LES NAG+ PA LIRQ+ REA +II+KGK C L I DL+ Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGE-PAKLIRQRYREAADIIRKGKMCALFINDLD 231
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 1.671e-81 Identity = 159/221 (71.95%), Postives = 180/221 (81.45%), Query Frame = 3 Query: 60 LSFNGFGAATSVPSSSFFGTSLKK-VGSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLE 710 L+ NG GA S P+S+FFGTSLKK V SR+P SKV + SFKI A E++E++QT KDRWKGLAYD SDDQQDIT GKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+L NIKVPLILGIWGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA ++I KGK C L I DL+ Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADLIAKGKMCALFINDLD 233
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 2.182e-81 Identity = 156/221 (70.59%), Postives = 179/221 (81.00%), Query Frame = 3 Query: 60 LSFNGFGAATSVPSSSFFGTSLKKV-GSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLE 710 L+ NG G S PSS+FFGTSLKKV SR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDIT GKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+L NIKVPLILG+WGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA ++IKKGK C L I DL+ Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREASDLIKKGKMCVLFINDLD 235
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 2.043e-79 Identity = 157/230 (68.26%), Postives = 176/230 (76.52%), Query Frame = 3 Query: 57 PLSFNGFGAATSVPSSSFFGTSLKKV-GSRIPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 PLS N A TSVPS++FFG +LKKV G + KV + S +I AE VD KQT DRWKGL D SDDQQDIT GKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ L NIKVPLILGIWGG+GQ KSFQC LVF KMGINPIMM+AG+LES NAG+ PA LIRQ+ REA EII+KG C L I DL+ GG Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGG 243
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 5.943e-79 Identity = 159/241 (65.98%), Postives = 183/241 (75.93%), Query Frame = 3 Query: 42 MAAAV---------PLSFNGFGA-ATSVPSSSFFGTSLKKVGSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 MAAAV PLS NG G+ A S P+S+F G + V +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDIT GKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHITKNF++L NIKVPLILGIWGG+GQ KSFQC LV AKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA ++IKKGK C L I DL+ GG Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 239
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.852e-78 Identity = 154/234 (65.81%), Postives = 176/234 (75.21%), Query Frame = 3 Query: 45 AAAVPLSFNGFGAATSVPSSSFFGTSLKKV-GSRIPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 A PLS N A TSVPS++FFG +LKKV G + KV + S +I AE D KQT DRWKGL D SDDQQDI GKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ L NIKVPLILG+WGG+GQ KSFQC LVF KMGINPIMM+AG+LES NAG+ PA LIRQ+ REA EII+KG C L I DL+ GG Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGG 243
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 9.488e-77 Identity = 145/206 (70.39%), Postives = 169/206 (82.04%), Query Frame = 3 Query: 93 VPSSSFFGTSLKKVGSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLE 710 VP+S+F G+ LK V SR SK+ + +FKI AE DE KQT+KD+W+GLA+D SDDQQDIT GKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++L NIKVPLILG+WGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA +IIKKGK C L I DL+ Sbjct: 25 VPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCLFINDLD 228
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.605e-76 Identity = 151/232 (65.09%), Postives = 180/232 (77.59%), Query Frame = 3 Query: 45 AAAVPLSFNGFGAATSVPSSSFFGTSLKKVGSR-IPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 A+ PLS N A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI GKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++L NIKVPLILG+WGG+GQ KSFQC LVF KMGINPIMM+AG+LES NAG+ PA LIRQ+ REA EII+KG C L I DL+ GG Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGG 238 The following BLAST results are available for this feature:
BLAST of EY665489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665489 ID=EY665489; Name=EY665489; organism=Citrus sinensis; type=EST; length=862bpback to top |