EY665482
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB1_ORYSJ (Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica GN=Os11g0174000 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.097e-22 Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRREAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +VAVNTVIQDEKEFLD IIKST+MKCLT PSALDG+CG +A NLYA S FGEDAL N+S+ K+ + G + R++TQG+ L G + T + GS Sbjct: 856 KVAVNTVIQDEKEFLDHIIKSTNMKCLTPPSALDGECGFIAANLYAKSVFGEDALVNISVEKQADGKLS-GYIRIRSKTQGIALSLGDKITLKQKGGS 952
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB2_ORYSJ (Coatomer subunit beta-2 OS=Oryza sativa subsp. japonica GN=Os01g0281400 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.192e-22 Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRREAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +VAVNTVIQ+EKEFLD IIKST+MKCLT PSALDG+CG LA NLYA S FGEDAL N+S+ K+ + G + R++TQG+ L G + T + GS Sbjct: 854 KVAVNTVIQNEKEFLDHIIKSTNMKCLTPPSALDGECGFLAANLYAKSVFGEDALVNISIEKQFDGKLS-GYIRIRSKTQGIALSLGDKITLKQKGGS 950
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB1_ARATH (Coatomer subunit beta-1 OS=Arabidopsis thaliana GN=At4g31480 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21 Identity = 56/91 (61.54%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRREAQWGTSK*RTRTQGMPLVWGKRTT 726 +VAVNT IQ+E+EFLD IIKST+MKCLTAPSA++G+CG LA NLYA S FGEDAL NVS+ K+T A G + R++TQG+ L G + T Sbjct: 852 KVAVNTTIQNEREFLDHIIKSTNMKCLTAPSAIEGECGFLAANLYAKSVFGEDALVNVSIEKQT-DGALSGYIRIRSKTQGIALSLGDKIT 941
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB2_ARATH (Coatomer subunit beta-2 OS=Arabidopsis thaliana GN=At4g31490 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 3.529e-21 Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRREAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +VAVNT IQ+E+EFLD IIKST+MKCLTAPSA+ G+CG LA NLYA S FGEDAL N+S+ K+T G + R++TQG+ L G + T + GS Sbjct: 852 KVAVNTTIQNEREFLDHIIKSTNMKCLTAPSAIAGECGFLAANLYAKSVFGEDALVNLSIEKQTDGTLS-GYIRIRSKTQGIALSLGDKITLKQKGGS 948
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB_RAT (Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14 Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRR---EAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +V VNT + D ++L I+KST+MKCLT AL G CG +A NLYA S FGEDAL NVS+ K + A G + R ++QGM L G + S ++ S Sbjct: 852 KVTVNTNVTDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTS 952
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB_BOVIN (Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14 Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRREAQ---WGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +V VNT I D ++L I+KST+MKCLT AL G CG +A NLYA S FGEDAL NVS+ K ++ + G + R ++QGM L G + S ++ S Sbjct: 852 KVTVNTNIVDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKNS 952
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB_MOUSE (Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14 Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRR---EAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +V VNT + D ++L I+KST+MKCLT AL G CG +A NLYA S FGEDAL NVS+ K + A G + R ++QGM L G + S ++ S Sbjct: 852 KVTVNTNMTDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTS 952
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB_HUMAN (Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14 Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRR---EAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +V VNT + D ++L I+KST+MKCLT AL G CG +A NLYA S FGEDAL NVS+ K + A G + R ++QGM L G + S ++ S Sbjct: 852 KVTVNTNMVDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTS 952
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB_CHICK (Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14 Identity = 47/101 (46.53%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRREAQ---WGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +V VNT I D E+L I+KST+MKCLT AL G CG +A NLYA S FGEDAL NVS+ K + G + R ++QGM L G + S ++ S Sbjct: 852 KVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTS 952
BLAST of EY665482 vs. ExPASy Swiss-Prot
Match: COPB_PONAB (Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13 Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 454 QVAVNTVIQDEKEFLDLIIKSTHMKCLTAPSALDGDCGVLATNLYATSGFGEDALGNVSLGKETRR---EAQWGTSK*RTRTQGMPLVWGKRTTSSGREGS 747 +V VNT + D ++L I+KST+MKCLT AL G CG +A NLYA S FGEDAL NVS+ K + A G + R ++QGM L G + S ++ S Sbjct: 852 KVTVNTNMIDLNDYLRHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTS 952 The following BLAST results are available for this feature:
BLAST of EY665482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665482 ID=EY665482; Name=EY665482; organism=Citrus sinensis; type=EST; length=891bpback to top |