EY665472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 6.225e-58 Identity = 131/216 (60.65%), Postives = 157/216 (72.69%), Query Frame = 1 Query: 169 ILCSPKQGSLRRRGNHNQGQRVNY-----RRFAVRASAKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 +LCS +Q L GN QGQRV+Y RRF+VRA+ K+IAFDQ S+AA+QAGIDKL+D VGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL MENAGAALIREVASKTNDSAGDGTTTAS+LAR+IIK LLSVT L+ + +++ +K + + ASIS GND+LI +MI + + +V P+G + ESSSS Sbjct: 12 VLCSSRQSKLGG-GNQQQGQRVSYNKRTIRRFSVRANVKEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKARPVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSS 226
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.003e-56 Identity = 129/215 (60.00%), Postives = 156/215 (72.56%), Query Frame = 1 Query: 169 ILCSPKQGSLRRRGNHNQGQRVNYR----RFAVRASAKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 +LCS +QG L G+ +GQRV+YR RF++RA+ K+IAFDQ S+AA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL MENAGAALIREVASKTNDSAGDGTTTASVLAR+IIK LLSVT L+ + +++ ++ + + A+IS GND LI MI + + +V P+G ESSSS Sbjct: 12 VLCSSRQGKLSG-GSQQKGQRVSYRKANRRFSLRANVKEIAFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRSRPVKGGRDIKAVATISAGNDELIGAMIADAIDKVGPDGVSPIESSSS 225
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 3.197e-54 Identity = 122/198 (61.62%), Postives = 147/198 (74.24%), Query Frame = 1 Query: 220 QGQRVNYR----RFAVRASAKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 Q RVN+R RF V+A+AKDIAFDQ S++AMQAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL PMENAGAALIREVASKTNDSAGDGTTTAS+LAR+IIKL LL+VT +++ + +++ + + + A+IS GND LI MI E + +V P+G + ESS+S Sbjct: 30 QHGRVNFRQKPNRFVVKAAAKDIAFDQHSRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLNVTSGANPVSIKKGIDKTVAALVEELEKLARPVKGGDDIKAVATISAGNDELIGKMIAEAIDKVGPDGVLSIESSNS 227
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 6.666e-52 Identity = 116/186 (62.37%), Postives = 140/186 (75.27%), Query Frame = 1 Query: 244 RFAVRASAKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 RF+VRA+ K+I+FDQ S+AA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL MENAGAALIREVASKTNDSAGDGTTTASVLAR+IIK LLSVT L+ + +++ ++ + + A+IS GND L+ TMI + + +V P+G + ESSSS Sbjct: 1 RFSVRANVKEISFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARPVKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVLSIESSSS 186
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50 Identity = 111/181 (61.33%), Postives = 138/181 (76.24%), Query Frame = 1 Query: 259 ASAKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 A AK+IAFDQ+S+AA+QAG++KL++AVG+TLGPRGRNVVLDE+G+PKVVNDGVTIARAIELA PMENAGAALIREVASKTNDSAGDGTTTA VLAR+IIKL +LSVT L++ + +++ K + + + ASIS GND LI MI + + +V P+G + ESSSS Sbjct: 2 ADAKEIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGNPKVVNDGVTIARAIELANPMENAGAALIREVASKTNDSAGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLIEELERKARPVKGSGDIKAVASISAGNDELIGAMIADAIDKVGPDGVLSIESSSS 182
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.205e-46 Identity = 106/169 (62.72%), Postives = 126/169 (74.56%), Query Frame = 1 Query: 295 KAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 + A+Q+GIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVN+GVTIARAIEL PMENAGAALIREVASKTNDSAGDGTTTASVLAR+IIKL LLSVT ++ + +++ +K + + ASIS GND LI TMI + + +V P+G + ESSSS Sbjct: 1 RTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSS 169
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.304e-39 Identity = 95/189 (50.26%), Postives = 128/189 (67.72%), Query Frame = 1 Query: 241 RRFAVRAS-AKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSS 801 RR +RA+ AK+I FDQ S+ +QAGI+K++DAVG+TLGPRGRNVVL++ FG P+V+NDGV+I RAIEL P+ENAGA LI+EVA +TND+AGDGTTTASVLAR++I L SVT ++ ++ K+ E + + ASIS GNDN I MI + + +V G + E+S+S Sbjct: 27 RRLVIRAADAKEIVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIRRAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADALDKVGSNGVLSIETSNS 215
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.800e-34 Identity = 82/181 (45.30%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 265 AKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSSI 804 AK + FD+ S+ A++ G++ L+DAV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ +EL P+ENAGA L+REVASKTND AGDGTTTA+VLA+ +I+ L +V L + + K++ K + I Q A+IS GND + MI + M +V +G E S S+ Sbjct: 2 AKHVVFDEESRRALERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPVAGDAIAQV-ATISAGNDTEVGQMIAQAMDKVGKDGVITVEESKSL 181
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.182e-32 Identity = 83/181 (45.86%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 265 AKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSSI 804 AK I FD+ ++ A++ G++ L+DAV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL P+EN GA LIREVASKTND AGDGTTTA+VLA+ +I+ L +V L+ + +++ + A+IS GND I MI E M +V EG E S S+ Sbjct: 2 AKMIVFDETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVEDNKTIAEVATISSGNDEEIGQMIAEAMDKVGKEGVITVEESKSL 182
BLAST of EY665472 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.440e-32 Identity = 80/181 (44.20%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 265 AKDIAFDQRSKAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELAYPMENAGAALIREVASKTNDSAGDGTTTASVLARKIIKL*LLSVTVWCKSCLLEERD**NCTWVGKKVGEKGQAYLRA*IYQTGASISCGNDNLIWTMIPEPMTRVSPEGAFANESSSSI 804 AK I +++ ++ A++ GID L++AV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL +EN G ALIR+ ASKTND+AGDGTTTA+VLA I+K L +V + LL+ ++ ++ E + + SIS GND+ + MI E M +V EG + E S+ Sbjct: 2 AKRIIYNENARRALERGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGIDKATGFLVDRIKEHARPVEDSKSIAQVGSISAGNDDEVGQMIAEAMDKVGKEGVISLEEGKSV 182 The following BLAST results are available for this feature:
BLAST of EY665472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665472 ID=EY665472; Name=EY665472; organism=Citrus sinensis; type=EST; length=897bpback to top |