EY665468

Overview
NameEY665468
Unique NameEY665468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.006e-89
Identity = 154/207 (74.40%), Postives = 178/207 (85.99%), Query Frame = 2
Query:   74 RTAEVIANVAERYAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTG 694
            RT EVIA+VAE  AEDI+RAV  AR AFDEGPWPKM+ YERSR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM  RL  YYAGWADKIHGLT+P DGNY + TLHEPIGVAGQI+PWNFP+L+F WKV PALACGNTIVLK+AEQTPLTA Y  KLF EAGLPPGVLN+ SG+G TAGAALA HM+V++L+F G+ DTG
Sbjct:   81 RTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTG 287          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 2.564e-85
Identity = 143/207 (69.08%), Postives = 178/207 (85.99%), Query Frame = 2
Query:   74 RTAEVIANVAERYAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTG 694
            R  EVIA V+E  AED++RAVA ARKAFDEGPWPKMT YERS+I+ R ADLIEK+ +E+AALETW+NGKPY QS + EVPM+ R+  YYAGWADKIHG+T+PGDG +H+QTLHEPIGVAGQI+PWNFP+L+ +WK+ PALACGNT+VLK+AEQTPL+AL + KL HEAGLP GV+N+ SG+G TAGAA+A HM+V++++F G+ D G
Sbjct:   77 RNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVG 283          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.259e-64
Identity = 117/208 (56.25%), Postives = 152/208 (73.08%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTGN 697
            T EVI  VAE   ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+  G+GPTAGAA+A H  V++++F G+ + G+
Sbjct:   63 TGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGH 270          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.256e-64
Identity = 117/208 (56.25%), Postives = 154/208 (74.04%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTGN 697
            T +VI +VAE   ED+DRAV  AR AF  G PW ++   +R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG+Y   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K +EQTPLTALY+A L  EAG PPGV+N+  GYGPTAGAA+A H +V++++F G+ + G+
Sbjct:   65 TGDVICHVAEGDKEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGH 272          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.256e-64
Identity = 117/208 (56.25%), Postives = 153/208 (73.56%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTGN 697
            T EVI  VAE   ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+  G+GPTAGAA+A H +V++++F G+ + G+
Sbjct:   44 TGEVICQVAEGSKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 251          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 4.256e-64
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTGN 697
            T +VI +VAE    D+DRAV  AR AF  G PW +M   ER R++ R ADLIE++   LAALET +NGKPY+ S   ++ MV++ L YYAGWADK HG T+P DG+Y   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+NV  G+GPTAGAA+A H +V++++F G+ + G+
Sbjct:   64 TGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 271          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.260e-64
Identity = 116/208 (55.77%), Postives = 153/208 (73.56%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTGN 697
            T EVI  VAE   ED+D+AV  A+ AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+  G+GPTAGAA+A H +V++++F G+ + G+
Sbjct:   63 TGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 270          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.238e-63
Identity = 111/207 (53.62%), Postives = 151/207 (72.95%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTG 694
            T E +  V E    DID+AV  AR AF  G  W +M   ER R++ + ADL+E++   LA +E+ N GKP++Q+   ++  V++ L YYAGWADKIHG+T+P DG+Y   T HEPIGV GQI+PWNFP+L+FTWK+APAL CGNT+V+K AEQTPL+ALY+  L  EAG PPGV+N+  GYGPTAGAA+A H+ +++++F G+ + G
Sbjct:   62 TGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVG 268          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.238e-63
Identity = 111/207 (53.62%), Postives = 151/207 (72.95%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTG 694
            T E +  V E    DID+AV  AR AF  G  W +M   ER R++ + ADL+E++   LA +E+ N GKP++Q+   ++  V++ L YYAGWADKIHG+T+P DG+Y   T HEPIGV GQI+PWNFP+L+FTWK+APAL CGNT+V+K AEQTPL+ALY+  L  EAG PPGV+N+  GYGPTAGAA+A H+ +++++F G+ + G
Sbjct:   62 TGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVG 268          
BLAST of EY665468 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.617e-63
Identity = 117/207 (56.52%), Postives = 151/207 (72.95%), Query Frame = 2
Query:   77 TAEVIANVAERYAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVASGYGPTAGAALAQHMNVNQLSFYGNCDTG 694
            T EVI  VAE   ED+D+AV  AR AF  G PW +M    R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+  G+GPTAGAA+A H +V++++F G+ + G
Sbjct:   61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 267          
The following BLAST results are available for this feature:
BLAST of EY665468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL2B4_ARATH1.006e-8974.40Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL2B7_ARATH2.564e-8569.08Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
ALDH2_MOUSE3.259e-6456.25Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_PIG4.256e-6456.25Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH2_MESAU4.256e-6456.25Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
ALDH2_BOVIN4.256e-6456.73Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH2_RAT7.260e-6455.77Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
AL1A2_RAT1.238e-6353.62Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Al... [more]
AL1A2_MOUSE1.238e-6353.62Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2... [more]
ALDH2_PONAB1.617e-6356.52Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665468 ID=EY665468; Name=EY665468; organism=Citrus sinensis; type=EST; length=874bp
CACGGGGCCCCTAGGACCGGCCCGGATTCCCGGGTCGACCCCGCGTCCGG
CAAACATTTCCGGTCTCCCTTTTCGTACTGCTGAAGTGATTGCTAATGTT
GCTGAACGATATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAA
GGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAA
GGATTATGTTGCGGGCTGCTGATTTGATTGAGAAAAACATGGAGGAGCTG
GCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAA
ATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGCTGGG
CTGATAAAATCCATGGACTAACTGTCCCTGGTGATGGAAATTACCATATT
CAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAA
CTTTCCTGTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAGCTTGTG
GTAATACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTCTG
TATTTGGCAAAGCTATTCCATGAGGCTGGTCTTCCCCCCGGTGTTTTGAA
TGTAGCCTCCGGTTATGGTCCCACAGCTGGTGCAGCTCTTGCCCAACATA
TGAATGTGAACCAACTGTCTTTTTACGGAAACTGTGACACTGGCAACAAT
GGTGACGGAATTGGCTGGGAAACGGCGCCCTTAGGCCCACCCACCTTACC
ACCCTGGAGGGAAAATCCCCCTTATCCCCCTCCCACCAACTGCCACCGCT
GACCACAATCCGGGACCCTCCCACCCTCTCCGTTCTGCTCACACCCTCAC
AGAACCAGCCACCCTCACCAACCC
back to top