EY720716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720716 vs. ExPASy Swiss-Prot
Match: RH53_ARATH (DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 66/142 (46.48%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 1 VPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQARQVKSIERDVGCRFTQLPRIAVE-GGGDMYNDMGGRSG---YGSMRDRQYADTGFDRSSPMGDPGFGPFWRVQTSWGRPVMVGITGSYAGQGGGVSLG 414 VPNVDLIIHYELPN +ETFVH SAILIY+ Q+R VK IER+VG RFT+LP IAVE G M+ +G RSG G MRDR G G G+G GS G GGG S G Sbjct: 414 VPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGIGSRSGGSFGGGMRDR-----GSSFGGRSGGGGYG------------------GSSGGYGGGRSGG 532
BLAST of EY720716 vs. ExPASy Swiss-Prot
Match: RH53_ORYSJ (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20 Identity = 61/150 (40.67%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 1 VPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQARQVKSIERDVGCRFTQLPRIAV-EGGGDMYN--------------------DMGGRSGYGSMRDRQYAD-TGFDRSSPMG----------DPGFGPFWRVQTSWGR 354 +PNVDL+IHYELPNTSE FVH SAILIYT+ QAR V+ IE+D+GC+FT+LP+I V + DM+N GG G+G R R + D GF S G GFG F R ++GR Sbjct: 393 IPNVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTELPKIEVADEASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFGSSPNRGGRSRDAGSRYGSGFGDFRRPSNAFGR 542
BLAST of EY720716 vs. ExPASy Swiss-Prot
Match: RH9_ARATH (DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 63/138 (45.65%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 1 VPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQARQVKSIERDVGCRFTQLPRIAVE-GGGDMYNDMGGRSGYGSMRDRQYADTGF-DRSSPMGDPGFGPFWRVQTSWGRPVMVGITGSYAGQGGGVS 408 VPNVDL+IHYELPN +ETFVH SAILI+ Q R VK IE++VG RF +LP IAVE G M+ +G RSG GS + G+ S G G G + S GR G GSY G GG S Sbjct: 426 VPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSG-GSFGGGRSGGGGYGSYGSSSGRSGGGSYGGYGGSSGR--SGGGGGSYGGSGGSSS 560
BLAST of EY720716 vs. ExPASy Swiss-Prot
Match: RH9_ORYSJ (DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica GN=Os12g0611200 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 58/146 (39.73%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 1 VPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQARQVKSIERDVGCRFTQLPRIAVE------GGGDMYNDMG-GRSGYGSMRDRQYADTGFDRSSPMGDPGFGPFWRVQTSWGRPVMVGITGSYAGQGGGVSLGR 417 +PNVDL+IH+ELPN+SE FVH AI++++ QQ+R ++ +E DVGC+FT+LP+I VE GG D + G GR G GS R + R GD GFG R +GR G S G G GR Sbjct: 407 IPNVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELPKINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFG---RSGGGFGRSGGGGFGRSSGGGFGDSGFGR 549
BLAST of EY720716 vs. ExPASy Swiss-Prot
Match: RH3_ORYSJ (DEAD-box ATP-dependent RNA helicase 3 OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 1 VPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQARQVKSIERDVGCRFTQLPRIAVE 201 +PNVDLIIHYELPN ETFVH +AIL++T+ Q R V+S+ERDVGCRF + A+E Sbjct: 416 IPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIE 482
BLAST of EY720716 vs. ExPASy Swiss-Prot
Match: RH3_ARATH (DEAD-box ATP-dependent RNA helicase 3 OS=Arabidopsis thaliana GN=RH3 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 1 VPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQARQVKSIERDVGCRF 174 +PNVDL+IHYELPN ETFVH SAIL++T Q R V+S+ERDVGC F Sbjct: 416 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHF 473 The following BLAST results are available for this feature:
BLAST of EY720716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720716 ID=EY720716; Name=EY720716; organism=Citrus sinensis; type=EST; length=709bpback to top |