EH406556

Overview
NameEH406556
Unique NameEH406556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC1_ARATH (Sucrose transport protein SUC1 OS=Arabidopsis thaliana GN=SUC1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.747e-41
Identity = 88/146 (60.27%), Postives = 106/146 (72.60%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPITEAG 440
            +LA  LA T L+TK AE +R++     G      P   VK GAL++F VLGIP AITFS PFA+ASIFS  S AGQGLSLGVLNLAIV+PQM+VSL  GPFDA+ GGGN+PAF+V A+AAA+SG++ALT+LPS   D P   T  G
Sbjct:  372 ILAAGLAMTVLVTKFAEDHRKTAGDLAG------PSASVKAGALSLFAVLGIPLAITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLPAFIVAAIAAAISGVLALTVLPSPPPDAPKATTMGG 511          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUT_SPIOL (Sucrose transport protein OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.506e-41
Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPITEAG 440
            +LA+ LA T L+TK AE  R S    G A    PPP GVK GALAIF VLGIP AITFS+PFA+ASIFS +S +GQGLSLGVLNLAIVVPQM VS+ SGP+DA+ GGGN+PAF+VGAVAA  S +++ TLLPS     PPP  + G
Sbjct:  380 ILAVCLAMTVLVTKSAEHFRDSHHIMGSAVPP-PPPAGVKGGALAIFAVLGIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGGNLPAFVVGAVAATASAVLSFTLLPS-----PPPEAKIG 519          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC2_ARATH (Sucrose transport protein SUC2 OS=Arabidopsis thaliana GN=SUC2 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.865e-40
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVP 419
            +LA+ LA T ++TK AE++RR     GGA     PP  V  GAL +F +LGIPQAITFS+PFA+ASIFS  S AGQGLSLGVLNLAIVVPQM++S+  GPFD + GGGN+PAF++GA+AAA+SG++ALT+LPS   D P
Sbjct:  370 ILAICLAMTVVVTKQAENHRRD---HGGAK--TGPPGNVTAGALTLFAILGIPQAITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIPAFVLGAIAAAVSGVLALTVLPSPPPDAP 503          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC5_ARATH (Sucrose transport protein SUC5 OS=Arabidopsis thaliana GN=SUC5 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38
Identity = 81/139 (58.27%), Postives = 102/139 (73.38%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVP 419
            +LA+ LA T L+TK AE +R       G      P  G+K G  ++FTVLGIP AIT+S+PFA+ASIFS  S AGQGLSLGVLN+AI +PQM+VS  SGP DA  GGGN+P+F+VGA+AAA+SG++ALT+LPS   D P
Sbjct:  371 ILAIGLAMTVLVTKSAEHHREIAGPLAG------PSSGIKAGVFSLFTVLGIPLAITYSIPFALASIFSTNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLPSFVVGAIAAAVSGVLALTVLPSPPPDAP 503          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC8_ARATH (Sucrose transport protein SUC8 OS=Arabidopsis thaliana GN=SUC8 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.155e-35
Identity = 77/132 (58.33%), Postives = 99/132 (75.00%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 398
            +LA+ LA T L+TK AE +RR       A  +  P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+AIV+PQM+VS   GP DA+ GGGN+P F+VGA+AAA+S +VA T+LP
Sbjct:  367 ILAVCLAMTVLVTKKAEEHRRI------AGPMALPTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPRFVVGAIAAAISSVVAFTVLP 492          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC9_ARATH (Sucrose transport protein SUC9 OS=Arabidopsis thaliana GN=SUC9 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 398
            +LA+ LA T L+TK AE +R+       A  +  P   ++ GAL++F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+AIV+PQM+VS   GP DA+ GGGN+P F+VGA+AA +S +VALT+LP
Sbjct:  366 ILAVCLAMTVLVTKKAEEHRKI------AGRMALPTNAIRDGALSLFAILGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPGFVVGAIAALISSVVALTVLP 491          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC6_ARATH (Putative sucrose transport protein SUC6 OS=Arabidopsis thaliana GN=SUC6 PE=5 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.210e-34
Identity = 75/132 (56.82%), Postives = 98/132 (74.24%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 398
            +LA+ LA T L+TK AE +RR       A  +  P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+ IV+PQM+VS   GP DA+ GGGN+P F+VGA+AAA+S +VA ++LP
Sbjct:  367 ILAVCLAMTVLVTKKAEEHRRI------AGPMALPTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLPGFVVGAIAAAISSVVAFSVLP 492          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC7_ARATH (Putative sucrose transport protein SUC7 OS=Arabidopsis thaliana GN=SUC7 PE=5 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.586e-33
Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 3
Query:    3 LLALSLAFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 398
            +LA+ LA T L+TK AE +RR       A  +  P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQ LSLGVLN+AIV+PQM+VS   GP DA+ G GN+P F+VGA+AAA+S IVA T+LP
Sbjct:  366 ILAVCLAMTVLVTKKAEEHRRI------AGPMALPTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQRLSLGVLNMAIVIPQMIVSFGVGPIDALFGDGNLPGFVVGAIAAAVSSIVAFTVLP 491          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUC4_ARATH (Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.222e-26
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 3
Query:  105 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPI 428
            PP  +   A+ IFT+LGIP AIT+SVP+A+ SI   +   GQGLSLGVLNLAIV+PQ++VS+ SGP+D + GGGN PA  VGA    + GIVA+  LP T    P P+
Sbjct:  402 PPASIVFAAVLIFTILGIPLAITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPALAVGAATGFIGGIVAILALPRTRIQKPIPL 509          
BLAST of EH406556 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSJ (Sucrose transport protein 2 OS=Oryza sativa subsp. japonica GN=SUT2 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 3
Query:  105 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 398
            PP G+ + +L +FT+LG P AIT+S+P+AMA+        GQGL++G+LNLAIV+PQ++VSL SGP+D + GGGN PAF V A A+ + G+VA+  LP
Sbjct:  392 PPTGIVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLP 489          
The following BLAST results are available for this feature:
BLAST of EH406556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUC1_ARATH5.747e-4160.27Sucrose transport protein SUC1 OS=Arabidopsis thal... [more]
SUT_SPIOL7.506e-4163.70Sucrose transport protein OS=Spinacia oleracea PE=... [more]
SUC2_ARATH4.865e-4061.87Sucrose transport protein SUC2 OS=Arabidopsis thal... [more]
SUC5_ARATH2.044e-3858.27Sucrose transport protein SUC5 OS=Arabidopsis thal... [more]
SUC8_ARATH6.155e-3558.33Sucrose transport protein SUC8 OS=Arabidopsis thal... [more]
SUC9_ARATH3.989e-3456.82Sucrose transport protein SUC9 OS=Arabidopsis thal... [more]
SUC6_ARATH5.210e-3456.82Putative sucrose transport protein SUC6 OS=Arabido... [more]
SUC7_ARATH2.586e-3357.58Putative sucrose transport protein SUC7 OS=Arabido... [more]
SUC4_ARATH5.222e-2654.63Sucrose transport protein SUC4 OS=Arabidopsis thal... [more]
SUT2_ORYSJ2.194e-2453.06Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DC02FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406556 ID=EH406556; Name=EH406556; organism=Citrus sinensis; type=EST; length=687bp
TCTTGTTGGCGCTTTCTTTGGCTTTCACCTTTTTGATTACCAAATTGGCC
GAGTCCAACCGCCGGTCCGTCACCACAGCAGGCGGCGCCACCCATATCTT
GCCGCCGCCGGTTGGTGTGAAAGTTGGCGCTTTGGCTATCTTCACTGTGT
TGGGAATTCCTCAAGCTATTACTTTCAGCGTTCCGTTTGCTATGGCATCC
ATATTTTCTAGAACTTCTGCTGCTGGTCAAGGGCTTTCGTTGGGTGTTTT
GAATCTTGCAATAGTTGTTCCACAGATGCTGGTGTCTTTACTTAGCGGAC
CCTTTGATGCCGTTTGCGGAGGTGGCAACATGCCGGCCTTTATGGTCGGC
GCAGTTGCGGCTGCCTTAAGTGGTATCGTTGCACTCACCCTGCTCCCATC
AACAACCGCGGATGTTCCCCCGCCGATAACTGAAGCCGGAACTGCAACCG
CAAATCAAACTAATAAGCTCTAGCTAGTCTTAGTTTGTTGGAAGAAAAGA
AGGGACAGACTTTTACTTTTTTTTTAAGTCATCCGAAATGTGCCTAACCC
CTGAGTATCTTTGGGAAAATAATTCTGCTGGTAAGTAAATGAATGTGGTG
CATGGCTGCAAGGCTTGTGTGTGTATGGAGTTTAAATGTATGTTGTTACT
TGTAAGTGAGTGAAATAATTGACAAGGTGTTTGTTCG
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