EY720711

Overview
NameEY720711
Unique NameEY720711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length278
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N R V M +FEKA DKI+MGAERRS+VM E ++++TAYHE+ HAI  RL+P+ D VHKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N R V M +FEKA DKI+MGAERRS+VM E ++++TAYHE+ HAI  RL+P+ D VHKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N R V M +FEKA DKI+MGAERRS+VM E ++++TAYHE+ HAI  RL+P+ D VHKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N R V M +FEKA DKI+MGAERRS+VM E ++++TAYHE+ HAI  RL+P+ D VHKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N R V M +FEKA DKI+MGAERRS+VM E ++++TAYHE+ HAI  RL+P+ D VHKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.495e-27
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N   V MSDFE A DKI MG+ERRS+VM E+++++TAYHE+ H I  RL+P+ D  HKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.682e-27
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR N R V M  FEKA DKI+MG+ERRS+VM + ++++TAYHE+ H I  RL+P  D  HKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIP 438          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.653e-26
Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 3
Query:    9 LARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            LARG+PG+SGAD+ANLVNEA LF AR N RTV M +FEKA DKI MG ERR+++M ++++++TAYHE+ HAI   L+P+ D VHKV IIP
Sbjct:   94 LARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIP 183          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.653e-26
Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 3
Query:    9 LARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            LARG+PG+SGAD+ANLVNEA LF AR N RTV M +FEKA DKI MG ERR+++M ++++++TAYHE+ HAI   L+P+ D VHKV IIP
Sbjct:  348 LARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIP 437          
BLAST of EY720711 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.282e-26
Identity = 55/91 (60.44%), Postives = 72/91 (79.12%), Query Frame = 3
Query:    6 ILARGSPGFSGADVANLVNEAGLFRARRNGRTVDMSDFEKANDKIIMGAERRSIVMPEEERKNTAYHESRHAIFARLLPKTDQVHKVPIIP 278
            I+ARG+PGFSGAD+ANLVNEA LF AR + R V M +FE+A DK++MG+ERRS+VM + ++++TAYHE+ H I  RL+P  D  HKV IIP
Sbjct:  348 IIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIP 438          
The following BLAST results are available for this feature:
BLAST of EY720711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
FTSH_SHIFL2.725e-2968.13Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_SALTY2.725e-2968.13Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI2.725e-2968.13Cell division protease ftsH OS=Salmonella typhi GN... [more]
FTSH_ECOLI2.725e-2968.13Cell division protease ftsH OS=Escherichia coli (s... [more]
FTSH_ECO572.725e-2968.13Cell division protease ftsH OS=Escherichia coli O1... [more]
FTSH_BUCBP1.495e-2764.84Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_BUCAP5.682e-2763.74Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH2_HAEIN1.653e-2663.33Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN1.653e-2663.33Cell division protease ftsH homolog 1 OS=Haemophil... [more]
FTSH_BUCAI6.282e-2660.44Cell division protease ftsH OS=Buchnera aphidicola... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-C11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720711 ID=EY720711; Name=EY720711; organism=Citrus sinensis; type=EST; length=278bp
CGACCATCCTGGCGCGCGGCTCGCCGGGCTTCTCGGGCGCCGACGTGGCC
AACCTGGTCAACGAAGCCGGCCTGTTCCGCGCGCGCCGCAATGGCCGCAC
GGTGGATATGTCCGACTTTGAAAAGGCCAACGACAAGATCATCATGGGCG
CCGAGCGCCGCTCGATCGTCATGCCCGAAGAGGAACGCAAGAACACCGCG
TACCACGAATCCCGCCATGCCATCTTTGCCCGCCTGCTGCCCAAGACCGA
CCAGGTCCACAAGGTGCCCATCATCCCG
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