FC871880

Overview
NameFC871880
Unique NameFC871880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3096 contig Csv1_Contig3096:1103..1675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.261e-34
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMNQ+PNPWHVSFSYARALQN+VL+TWQG+PE  EA+QK+LLVRAKANSLAQLGKYSAEGE+E+AKKGMFVKGYTY
Sbjct:  314 LNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.395e-33
Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMNQAPNPWHVSFSYARALQNT LKTW GRPEN  AAQ +LL RAKANSLAQLGKY+ EGESEEAK+GMFVKGYTY
Sbjct:  321 LNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.486e-32
Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMNQAPNPWHVSFSYARALQNT LKTW G+ EN +AAQ  LL RAKANSLAQLGKY+ EGESEEAK+GMFVKGYTY
Sbjct:  322 LNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.462e-30
Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMNQ PNPWHVSFSYARALQNT LKTW G+PEN +AAQ +LL+RAKANSLAQLGKY+++GE+ EAK+GMFVK Y Y
Sbjct:  311 LNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30
Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMN++PNPWHVSFSYARALQNT LKTW G PEN +AAQ++LL RAK+NSLAQLGKY  +GESEEAKK +FVKGY+Y
Sbjct:  279 LNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMN++PNPWHVSFSYARALQNT LKTW G PEN +AAQ++LL RAK+NSLAQLGKY  +GESEEAKK    +GY+Y
Sbjct:  273 LNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVK 223
            LNAMNQ+PNPWHVSFSYARALQNT LKTW    EN +A        AK+NSLAQLGKY+ EGESEE KK MFVK
Sbjct:  319 LNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVKAQD---FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 2
Query:    2 LNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMNQ+PNPWHVSFSYARAL NTVLKTWQ  P   +A + +   R KANS AQ GKY A  E +EA +GM+ KG  Y
Sbjct:  296 LNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.073e-17
Identity = 45/79 (56.96%), Postives = 55/79 (69.62%), Query Frame = 2
Query:    2 LNAMNQAPN-PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMN  PN PW +SFSY RALQ +V+ TW+G   N EAA+K  L RAK NSLAQLGKY+ E  +  A + ++VK Y Y
Sbjct:  279 LNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14
Identity = 40/80 (50.00%), Postives = 48/80 (60.00%), Query Frame = 2
Query:    2 LNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMN  +   PW +SFSY RALQ + LK WQG+ EN   AQ+  L RAK NS A LGKY       +A + + VK Y Y
Sbjct:  278 LNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of FC871880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ALFC3_ARATH1.261e-3487.18Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_ARATH1.395e-3387.18Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH4.486e-3284.62Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ2.462e-3078.21Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA5.484e-3078.21Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA1.264e-2674.36Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL7.179e-2271.62Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE8.776e-2062.82Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI1.073e-1756.96Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_SPIOL1.894e-1450.00Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CC08FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3CC08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871880 ID=FC871880; Name=FC871880; organism=Citrus sinensis; type=EST; length=573bp
CTTGAATGCGATGAACCAAGCCCCCAACCCCTGGCACGTGTCCTTTTCTT
ATGCCCGTGCACTTCAGAACACTGTTCTTAAGACATGGCAAGGTCGTCCT
GAGAATACTGAAGCTGCACAAAAGTCACTATTGGTGCGTGCAAAGGCAAA
TTCCTTGGCGCAGCTTGGGAAGTACTCCGCAGAAGGTGAAAGCGAGGAAG
CCAAGAAAGGAATGTTTGTCAAGGGCTACACTTACTAAGCCAATAATATA
CTATGCAGTTTGAGCCTGCCTGAGGCAACTCATGACACTTGTGTCATTGC
GCACTTGCTTTTGTTTTGGTTCCTTCCCTTTTTTTAAAATTTTTTTGGGG
GCAAGCGATTGATACGGACAAGATTTGTATTAGAAGTTTTTTCATTTTCT
TTTACCCACCTAATAACTAGAGAGCTTGAATAAAACCTGTGAGATAAGAA
AAGATTTTACAAACTGTAGCCCAGCGAAAGGGGGACTAGTTAAACAAGAA
TCATTGTATTTCTATGTTTTTATGCTACTGTACTCTAAATTATGAGTTCA
AAAAAAAAAAAAAAAAAAAAAAA
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