CX674031

Overview
NameCX674031
Unique NameCX674031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.026e-78
Identity = 157/199 (78.89%), Postives = 176/199 (88.44%), Query Frame = -1
Query:  278 AEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSSVDDDLANXXXXXXXXXXXXXLPPGRA---AASSTNTAFPFRDAEIEKELNELRQRAKD 865
            A+QASE+WYRKAQLALQKGEEDLAREALKRRKS+ADNA++LKAQLDQQK+VV+NLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+TMESQA++L QLTTDDLEGKFA+LETSSVDDDLAN             LPPGR+   + +ST T  PFRDA+IE EL +LR+R+K+
Sbjct:  124 AQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMTMESQAEALGQLTTDDLEGKFAMLETSSVDDDLANLKKELAGSSKKGELPPGRSSTTSTTSTKTGNPFRDADIEIELEQLRKRSKE 322          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.254e-76
Identity = 150/197 (76.14%), Postives = 167/197 (84.77%), Query Frame = -1
Query:  275 AEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSSVDDDLANXXXXXXXXXXXXXLPPGRAAASSTNTAFPFRDAEIEKELNELRQRAKDF 865
            AEQAS+DWYR+AQLALQKG+EDLAREALKRRKSYADNA++LKAQLDQQK VV NLVSNTR+LESKI EA+ KKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKV+ MESQA++L QL TDDLEGKFALLETSSVDDDLA              LPPGR A S++  A PFRD EIE ELNELR++A ++
Sbjct:  121 AEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQAEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPFRDIEIENELNELRKKANEY 317          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.343e-70
Identity = 137/197 (69.54%), Postives = 166/197 (84.26%), Query Frame = -1
Query:  275 AEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSSVDDDLANXXXXXXXXXXXXXLPPGRAAASSTNTAFPFRDAEIEKELNELRQRAKDF 865
            A+Q+S+DWY++AQLAL KG+EDLAREALKRRKS+ADNA ALK QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKV+ MES+AD+L Q+ TD+LEGKF +LETSSVDDDLA+             LPPGR+  ++ +T +PF+D+EIE ELNELR++A DF
Sbjct:  135 AQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGALSAFEKMEEKVMAMESEADALTQIGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGELPPGRSTVAA-STRYPFKDSEIENELNELRRKANDF 330          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30
Identity = 85/203 (41.87%), Postives = 121/203 (59.61%), Query Frame = -1
Query:  287 QASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSS-VDDDLANXXXXXXXXXXXXXLPPGRAAASSTNTAFPF-----------RDAEIEKELNELRQR 859
            Q ++ W  +A+LAL  GEE+LAREAL R+KS  D A A + QL QQ+ +  NL  N   LE+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KVL ME+ + +  +L    +E +FA LE SS V+D+LA                PG +AA+    A P             DA I++EL++LR+R
Sbjct:   66 QEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKISEAKTKKNMLQARAKAAKANAELQQTLGGLGTSSATSAFERMENKVLDMEATSQAAGELAGFGIENQFAQLEASSGVEDELAALKASMAGGAL-----PGTSAATPQLEAAPVDSSVPANNASQDDAVIDQELDDLRRR 263          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.236e-16
Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = -1
Query:  425 DWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTD-DLEGKFA-LLETSSVDDDLA 847
            ++ +KA+ AL+ G EDLAREAL+R +++ D A     Q   Q++ V+ L +  R LE+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+KV  ME +  ++ +L  D D + +   L     VDD LA
Sbjct:   70 EYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLRALEAKIDEMESKKTLLAARQKTAQAGETLDRVSGFSKAGGAMDAFNEMEQKVAGMEDRNKAMGELRNDQDFDAQLKDLGRDKDVDDALA 212          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11
Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = -1
Query:  425 EQASE---DWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLET-SSVDDDLA 862
            EQAS    +W  KA+LAL K  EDLAR AL  ++   D   +L+ ++    + +  +      LE+K+ E R+++  L  R Q+A ++  V   L +     A++ FE  E ++  ME++A+S +      L+ +FA L+   ++ + LA
Sbjct:   62 EQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLA 211          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11
Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = -1
Query:  425 EQASE---DWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLET-SSVDDDLA 862
            EQAS    +W  KA+LAL K  EDLAR AL  ++   D   +L+ ++    + +  +      LE+K+ E R+++  L  R Q+A ++  V   L +     A++ FE  E ++  ME++A+S +      L+ +FA L+   ++ + LA
Sbjct:   62 EQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLA 211          
BLAST of CX674031 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11
Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = -1
Query:  425 EQASE---DWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLET-SSVDDDLA 862
            EQAS    +W  KA+LAL K  EDLAR AL  ++   D   +L+ ++    + +  +      LE+K+ E R+++  L  R Q+A ++  V   L +     A++ FE  E ++  ME++A+S +      L+ +FA L+   ++ + LA
Sbjct:   62 EQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLA 211          
The following BLAST results are available for this feature:
BLAST of CX674031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
IM30_PEA1.026e-7878.89Membrane-associated 30 kDa protein, chloroplastic ... [more]
IM30_ORYSJ1.254e-7676.14Probable membrane-associated 30 kDa protein, chlor... [more]
IM30_ARATH1.343e-7069.54Probable membrane-associated 30 kDa protein, chlor... [more]
Y617_SYNY31.358e-3041.87Uncharacterized protein sll0617 OS=Synechocystis s... [more]
PSPA_DEIRA7.236e-1636.36Phage shock protein A homolog OS=Deinococcus radio... [more]
PSPA_SHIFL3.146e-1130.00Phage shock protein A OS=Shigella flexneri GN=pspA... [more]
PSPA_ECOLI3.146e-1130.00Phage shock protein A OS=Escherichia coli (strain ... [more]
PSPA_ECO573.146e-1130.00Phage shock protein A OS=Escherichia coli O157:H7 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_3F10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-3F10-L19-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674031 ID=CX674031; Name=CX674031; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTTTTTTTTAAGTCCAAGCACAAGGGTAGCTACTGCACAGTCATG
TACATTACAATTAGAAGAAAATGGTGTGCAAAATAAGATCCATATGAAAA
ACAGGGATAAACAAATCACTAATTATTTGAGTTTGGCCTCCAGCTATACA
ACGTTTTATCCGTTTGGCCTCGTAGCTTTACAAGGTCAATAGGTAGGCTA
AACAAAAATTCGTTCAATTTTGAGCTTGAATTCTGAATTTGTAACCATAT
TTGCAATGTGTAGTGAGAACTTCAGAAATCTTTTGCTCTCTGCCTCAACT
CGTTCAATTCCTTCTCAATTTCCGCATCTCGAAATGGAAATGCAGTGTTT
GTGCTGCTAGCAGCAGCCCTTCCAGGTGGAAGCTCTCCTTTCTTTGAGCT
GCCAGATAGTTCCTTTTTAAGGTTTGCAAGATCATCGTCAACGGATGAGG
TCTCAAGTAGTGCAAACTTTCCTTCAAGATCATCGGTAGTTAACTGGTTA
AGAGAATCTGCTTGGGACTCCATTGTCAACACTTTCTCTTCCATTTTTTC
AAAAGCTGAAAGAGCACTGCTAGTGTTGACATTCCCCAACATCTCGCTCA
CTTTGGTTGCAGTCTTTGCAGACTGAGCCCTTGCTTTCAGAGTATCTTTC
TTTGATCTTGCCTCCTGTATCTTGCTCTCCAAAAGCCGAGTATTAGAAAC
AAGGTTATTAACAACATTCTTTTGTTGATCAAGTTGAGCTTTCAAAGCAT
TAGCATTATCTGCATAAGATTTGCGTCTCTTGAGAGCCTCACGTGCCAGA
TCTTCTTCCCCTTTTTGAAGAGCGAGCTGTGCTTTGCGATACCAGTCTTC
AGAAGCTTGCTCTGC
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