CX674012

Overview
NameCX674012
Unique NameCX674012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.415e-67
Identity = 125/146 (85.62%), Postives = 132/146 (90.41%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PKTKKILQLLRLRQIFNGVFLKVNKA++NML RVEPYVTYG+PNLKSVKELIYKRGYGKLN QRIALTDNSI+EQALG+HGIIC EDLIHEILTVGPHFKEANNFLWPF           KRNHYVEGGDAGNRE++INELIRRMN
Sbjct:   97 PKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.848e-67
Identity = 123/146 (84.25%), Postives = 133/146 (91.10%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PKTKKILQLLRLRQIFNGVFLKVNKA++NML RVEPYVTYGYPNLKSVKELIYKRGYGKLN QRIALTDNSI++QALG+HGIIC+EDLIHEI+TVGPHFKEANNFLWPF           KRNHYVEGGDAGNRE++INEL+RRMN
Sbjct:   97 PKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.553e-66
Identity = 120/146 (82.19%), Postives = 131/146 (89.73%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PKTKKILQLLRLRQIFNGVFLKVNKA++NML RVEPYVTYGYPNLKSVKELIYKRG+GKLN QR ALTDNSI++Q LG+HGIIC+EDLIHEI+TVGPHFKEANNFLWPF           KRNHYVEGGDAGNRE++INEL+RRMN
Sbjct:   99 PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.124e-56
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++LG++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  102 PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_MOUSE (60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.124e-56
Identity = 106/146 (72.60%), Postives = 120/146 (82.19%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDNS+I ++LG+ GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  125 PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.124e-56
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++LG++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  102 PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_HUMAN (60S ribosomal protein L7 OS=Homo sapiens GN=RPL7 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.124e-56
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++LG++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  103 PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.124e-56
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++LG++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  103 PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_RAT (60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.917e-56
Identity = 105/146 (71.92%), Postives = 120/146 (82.19%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDNS++ ++LG+ GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  115 PKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260
[Close]
BLAST of CX674012 vs. ExPASy Swiss-Prot
Match: RL7_CHICK (60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 102/146 (69.86%), Postives = 118/146 (80.82%), Query Frame = -2 
Query:  203 PKTKKILQLLRLRQIFNGVFLKVNKASLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 640
            PK +K+LQLLRLRQIFNG F+K+NKAS+NML  VEPY+ +GYPNLKSV +LIYKRGYGK+NK+RIALTDNS+I + LG+ GIICMED+IHEI TVG +FK  NNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:  101 PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRKRLGKLGIICMEDVIHEIYTVGKNFKVVNNFLWPFKLSSPRGGMKKKTIHFVEGGDAGNREDQINRLIRRMN 246
The following BLAST results are available for this feature:
BLAST of CX674012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL72_ARATH1.415e-6785.6260S ribosomal protein L7-2 OS=Arabidopsis thaliana... [more]
RL73_ARATH1.848e-6784.2560S ribosomal protein L7-3 OS=Arabidopsis thaliana... [more]
RL74_ARATH4.553e-6682.1960S ribosomal protein L7-4 OS=Arabidopsis thaliana... [more]
RL7_PONAB1.124e-5671.9260S ribosomal protein L7 OS=Pongo abelii GN=RPL7 P... [more]
RL7_MOUSE1.124e-5672.6060S ribosomal protein L7 OS=Mus musculus GN=Rpl7 P... [more]
RL7_MACFA1.124e-5671.9260S ribosomal protein L7 OS=Macaca fascicularis GN... [more]
RL7_HUMAN1.124e-5671.9260S ribosomal protein L7 OS=Homo sapiens GN=RPL7 P... [more]
RL7_BOVIN1.124e-5671.9260S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=... [more]
RL7_RAT1.917e-5671.9260S ribosomal protein L7 OS=Rattus norvegicus GN=R... [more]
RL7_CHICK5.221e-5469.8660S ribosomal protein L7 OS=Gallus gallus GN=RPL7 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3E09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-3E09-J17-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674012 ID=CX674012; Name=CX674012; organism=Citrus sinensis; type=EST; length=641bp
GAAAACAAAAAATAAAATTTGGAATGATAATCCAGTCTGAAGCCAAAATA
ACAACACTGTCACTGTTATAAAAAGTAAGAAAGTTTCTACTTAACTTCCA
GGGAAAAGGCTGGGAATAATAGGAAACACTAAAAGCCAAAATTTAAGATA
TTGATCACATCAAAACTTCTTCAAAAGGGGTAGGATATTCTGCAGAAGCC
TAGTTCATCCTTCTGATGAGCTCATTGATGTAATCTTCACGGTTTCCTGC
ATCACCGCCTTCAACATAGTGGTTCCTCTTCTTCTTCAGGCCACCCAATG
GTGCCTTGAGCTTGAAGGGCCATAGGAAGTTGTTTGCCTCCTTGAAGTGA
GGACCAACAGTCAAAATCTCATGGATGAGATCTTCCATGCAGATAATTCC
ATGCTGCCCAAGAGCCTGTTCGATGATAGAATTGTCGGTCAAAGCAATCC
TCTGCTTATTTAATTTGCCGTAACCCCTCTTGTAAATCAGTTCTTTGACA
CTCTTTAAATTGGGGTACCCATATGTTACATAGGGCTCAACTCTGTGCAG
CATATTGAGTGAGGCTTTGTTCACTTTCAAAAAGACACCATTAAAAATCT
GTCTCAAACGGAGAAGCTGCAAAATTTTCTTGGTCTTTGGA
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