EY679011

Overview
NameEY679011
Unique NameEY679011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679011 vs. ExPASy Swiss-Prot
Match: CPR49_ARATH (GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.797e-29
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 1 
Query:   13 WKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYDLVAASGERTLNPSDWTFHREIQWD 243
            WK  CFTDGIHLS +GSKIV  EIL+V+K+AEW PSLHWKSMPTEF++DSPYDLV+A G++T+N S+WT+  E QWD
Sbjct:  180 WKTVCFTDGIHLSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYDLVSADGKQTVNSSEWTYFWEEQWD 256
[Close]
BLAST of EY679011 vs. ExPASy Swiss-Prot
Match: GDL46_ARATH (GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana GN=At2g38180 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.163e-13
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1 
Query:   13 WKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSED 159
            W N+CFTDGIH + + S+IVV EILKVL+ A+WKPSL+WKS+P EF  D
Sbjct:  178 WLNSCFTDGIHFTAKASEIVVKEILKVLRGADWKPSLYWKSLPVEFPFD 226
The following BLAST results are available for this feature:
BLAST of EY679011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CPR49_ARATH4.797e-2970.13GDSL esterase/lipase CPRD49 OS=Arabidopsis thalian... [more]
GDL46_ARATH2.163e-1365.31GDSL esterase/lipase At2g38180 OS=Arabidopsis thal... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679011 ID=EY679011; Name=EY679011; organism=Citrus sinensis; type=EST; length=583bp
CCACGCGTCCGTTGGAAGAATGCCTGCTTCACAGACGGGATTCATCTGTC
AGAAGAAGGAAGCAAGATTGTAGTAGCAGAGATACTGAAGGTGCTCAAGC
AAGCTGAATGGAAGCCATCTCTACACTGGAAGTCCATGCCCACCGAATTT
TCTGAGGACTCACCTTATGATCTTGTTGCCGCCAGCGGTGAAAGGACCTT
AAATCCCTCTGATTGGACCTTTCACAGGGAGATTCAATGGGACTAACTTG
CGGACTCATCTTATGCTTTTGCAGTGTTTGCAGGAGCCATGCCCAGCAAG
TTGAACACATTTACATGGGCACTGCCAAAAACAAACAAACTTTCAATGAT
GAATTATTATTAAGTAGTCATGAATTTCATTTTTCTTTTAGTAGCAAATT
GTTTCCTGTATAGGTCACATATCTCAGACCGTTGATCCTCTACCGAAGCT
CTATTACTGTGATATTTATTTTTTCTTGAAATTCTTCTGTCTATAAATTC
GTTGTTGACCGCTACGGAAATTTATGAAAAACAAATATTGTCCCCNATTN
AAAAAAAAAAAACAAAAANAAAATAAATAAAAG
back to top