CV885283

Overview
NameCV885283
Unique NameCV885283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.337e-80
Identity = 144/163 (88.34%), Postives = 155/163 (95.09%), Query Frame = 3
Query:  339 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            MAGNG+F +I++GDVFKYY++GEWKKS SGKSV I+NPTTR+T YKVQAC+QEEVNKVME AK AQK WAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEV+RSGDLVSY AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGV+L
Sbjct:    1 MAGNGVFVDIIEGDVFKYYSEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVMEVAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYTAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVIL 163          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_PEA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.978e-80
Identity = 144/163 (88.34%), Postives = 154/163 (94.48%), Query Frame = 3
Query:  339 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            MA  G+ AEI+DGDV+KYYADGEWKKS SGKSV I+NPTTR+  YKVQACSQEEVNKVM++AK+AQK WAKTPLWKRAELLHKAAAILKEHKA IAECLVKEIAKPAKDAVTEV+RSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGV+L
Sbjct:    1 MAATGVLAEIIDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVIL 163          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_APIGR (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.134e-78
Identity = 138/163 (84.66%), Postives = 154/163 (94.48%), Query Frame = 3
Query:  339 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            MAG+G++A+I++GDVFKYY+DGEWKKS+SGKSV I+NPTTR T +KVQAC+QEEVNK ME AK  QK WAKTPLWKRAELLHKAAAILKEHKA IA+CLVKEIAKPAKD+VTEV+RSGDLVSYCAEEGVR+LGEGKFLVSDSFPGNERTKYCLTSKIPLGV+L
Sbjct:    1 MAGSGVYADIIEGDVFKYYSDGEWKKSSSGKSVAIINPTTRMTQFKVQACTQEEVNKAMETAKKVQKQWAKTPLWKRAELLHKAAAILKEHKAAIADCLVKEIAKPAKDSVTEVVRSGDLVSYCAEEGVRLLGEGKFLVSDSFPGNERTKYCLTSKIPLGVIL 163          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_ARATH (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 6.866e-77
Identity = 138/163 (84.66%), Postives = 154/163 (94.48%), Query Frame = 3
Query:  339 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            MAG G+FAEILDG+V+KYYADGEWK S+SGKSV I+NP TR+T YKVQAC+QEEVN VME AK+AQK WAKTPLWKRAELLHKAAAILK++KAP+AE LVKEIAKPAKD+VTEV+RSGDL+SYCAEEGVRILGEGKFL+SDSFPGN+RTKYCLTSKIPLGVVL
Sbjct:    1 MAGTGLFAEILDGEVYKYYADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSAQKSWAKTPLWKRAELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILGEGKFLLSDSFPGNDRTKYCLTSKIPLGVVL 163          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 9.915e-76
Identity = 135/163 (82.82%), Postives = 152/163 (93.25%), Query Frame = 3
Query:  339 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            +AG G+FAEILDG+V++YYADGEW+ S SGKSV IVNPTTR+T Y+VQAC+QEEVNK M+AAK AQK WA+TPLWKRA++LHKAAAILKEHKAPIAECLVKEIAKPAKDAV+EV+RSGDLVSY AEEGVRILGEGK +VSDSFPGNER KYCL+SKIPLGVVL
Sbjct:    3 LAGTGVFAEILDGEVYRYYADGEWRTSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAMDAAKVAQKAWARTPLWKRADVLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLVVSDSFPGNERNKYCLSSKIPLGVVL 165          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 3.768e-75
Identity = 135/163 (82.82%), Postives = 151/163 (92.64%), Query Frame = 3
Query:  339 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            MAG G+FA++LDG+V+KYYADGEW+ S SGK+V IVNPTTR+T Y+VQAC+QEEVNKVM+AAK AQK WA+TPLWKRAELLHKAAAILKEHK PIAE LVKEIAKPAKDAV+EV+RSGDLVSY AEEGVRILGEGK LVSDSFPGNER KYCL+SK+PLGVVL
Sbjct:    1 MAGTGVFADVLDGEVYKYYADGEWRASASGKTVAIVNPTTRQTQYRVQACTQEEVNKVMDAAKVAQKSWARTPLWKRAELLHKAAAILKEHKTPIAESLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVL 163          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.456e-23
Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 3
Query:  384 FKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            +K Y +GEWK S   + + I  P T      V A SQEEV+ V  +AKAAQK W      +RAE LHKAA IL      I   L KEIAK  K AV EVIR+ ++++Y AEEGVR+  EG+ L   SF    + K  +  + P+G+VL
Sbjct:    5 YKNYVNGEWKLSK--EEIKIYAPATGEELGSVPAMSQEEVDYVYASAKAAQKAWRALSYVERAEYLHKAADILMRDAEKIGAVLSKEIAKGYKSAVGEVIRTAEIINYAAEEGVRL--EGEVLEGGSFDPASKKKIAIVRREPVGLVL 148          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: GAPN_STRMU (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans GN=gapN PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.908e-20
Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 3
Query:  384 FKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVL 827
            +K Y +GEWK S +   + I  P +      V A S EEV+ V  +AK AQ  W      +RA  LHK A IL   K  I   L KE+AK  K AV+EV+R+ ++++Y AEEG+R+  EG+ L   SF    + K  +  + P+G+VL
Sbjct:    5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EGEVLEGGSFEAASKKKIAVVRREPVGLVL 148          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.709e-14
Identity = 50/145 (34.48%), Postives = 73/145 (50.34%), Query Frame = 3
Query:  393 YADGEWKKSNSGKSVPIVNPTTRRTHYK-VQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVV 824
            Y +G W  S S    P +NP  R      VQ  + E+VN+ + AA  AQ  W K    +R E L+KAA IL++    IAE + +E+ K   +A  E +R   ++ Y A EG R +G       D  P ++      T+++PLGVV
Sbjct:   13 YINGNWVSSVSNNVEPSINPANRHDIVGYVQRSTLEDVNEAVTAANEAQTSWWKRSGVERGEYLYKAAHILEQCLQDIAETMTREMGKTLAEAKAETMRGVHILRYYAGEGARKIG-------DVIPSSDSEGLLFTTRVPLGVV 150          
BLAST of CV885283 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.101e-13
Identity = 47/154 (30.52%), Postives = 75/154 (48.70%), Query Frame = 3
Query:  366 ILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYK-VQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVV 824
            I + + +  + +GEW KS SG  V + NP         VQ  + E+V + + AA  A+  W K    +R + L+K A I+++    IA C  +E+ K   +A  E  R   ++ Y A EG+R  G       D  P  ++     T+++PLGVV
Sbjct:    4 ITEQNTYLNFINGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTLPEAKGETARGIAILRYYAGEGMRKTG-------DVIPSTDKDALMFTTRVPLGVV 150          
The following BLAST results are available for this feature:
BLAST of CV885283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GAPN_NICPL1.337e-8088.34NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_PEA2.978e-8088.34NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_APIGR2.134e-7884.66NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_ARATH6.866e-7784.66NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_MAIZE9.915e-7682.82NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_WHEAT3.768e-7582.82NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STREI7.456e-2344.59NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STRMU5.908e-2039.19NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ALDH_BACST3.709e-1434.48Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
ALDH1_BACSU4.101e-1330.52Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885283 ID=CV885283; Name=CV885283; organism=Citrus sinensis; type=EST; length=827bp
TTTGATGCTGATAAATTATTATAAATAACCAACATGCAGGCTATTGCATT
ACACCCACTAATACAAAATAAACAAATGACAACAACAAAAAATAAAAATA
ATTAAGAAAAGATGATACCTTAATCTTTTGTCATGAGTAGTACAAGCCAG
CCCTACTGTCTGCTGAACACTATTATTAAAATAATCTCAAGACAAGATTA
TGGTAACCCCAATAGCTTCATAAACAAAGAACATTGTCTCCTCAAATACT
AATTTATTGCCCTAAACATTACTATTTTTTCAGTCTTCAGTTGACCTTCT
TCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTGGCAAT
GGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTATGCTGA
TGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGTCAACC
CCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAGAGGAG
GTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGGGCAAA
GACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGCAATTC
TCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAATTGCA
AAGCCAGCGAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGATTTGGT
CTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAAGTTTT
TGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTCTCACT
TCAAAGATTCCACTTGGTGTGGTTTTG
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