EY720684

Overview
NameEY720684
Unique NameEY720684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.664e-20
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 1
Query:   13 YMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHAS 228
            Y++EHD CI++D R + SWG +W++I+GL A  +  Y  YKYRIR YMDSEIRAIMAQYMPLD+    Q +S
Sbjct:  550 YIREHDICINRDARGDFSWGVIWIIIMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDNNPNTQLSS 621          
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   13 YMQEHDTCIS--KDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHASHGDV 240
            YM+EHDTCI   K   ++ SW F+W++I+G+   G++GYA YKYRIR YMD+EIR IMAQYMPL+SQ       H D+
Sbjct:  546 YMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQPPNTSGHHMDI 623          
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 1
Query:   13 YMQEHDTCISKD-VRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHASHGD 237
            YM++HDTCISK   + +++W  VW+++L L       Y  YKYR+R+YMDSEIRAIMAQYMPLDSQ EV + ++ +
Sbjct:  551 YMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEVPNHTNDE 626          
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 1
Query:   13 YMQEHDTCISKD-VRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEV 216
            Y+++HDTCISK   +  ++W  VW+++L L       Y  YKYR+R+YMDSEIRAIMAQYMPLDSQ E+
Sbjct:  551 YIRDHDTCISKTGAQVRSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEI 619          
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 1
Query:   13 YMQEHDTCISKDV-RSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAE-VQHASH 231
            Y+++ DTCISK   +++++W   W+V++ LA     G+  YKYRIR+YMDSEIRAIMAQYMPLDSQ E   H +H
Sbjct:  546 YIKDQDTCISKTASQAKSTWAAFWVVLIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQEEGPNHVNH 620          
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   13 YMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQ 207
            YM+E DTCI +   S   W   ++++  +A+  V GY FYKYR+R YMDSEI AIM+QYMPL+SQ
Sbjct:  538 YMKEQDTCIERS-GSRIGWFPTFVILAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQ 601          
BLAST of EY720684 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   13 YMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQ 207
            Y+ + DTCI +   S+ +W   ++++  +A  G+AGY FYKYR R YMDSEI  IM+QYMPL+SQ
Sbjct:  548 YINDQDTCIER-YGSKTAWWLTFLILAIVAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQ 611          
The following BLAST results are available for this feature:
BLAST of EY720684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
VSR2_ARATH3.664e-2058.33Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR1_ARATH1.540e-1855.13Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR4_ARATH1.702e-1753.95Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR3_ARATH6.468e-1756.52Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR1_PEA3.210e-1654.67Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR6_ARATH9.666e-1353.85Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR7_ARATH1.262e-1250.77Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720684 ID=EY720684; Name=EY720684; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGGTACATGCAAGAGCATGACACCTGCATAAGCAAAGATGT
TAGATCGGAGGCTAGCTGGGGCTTTGTATGGATGGTCATTCTTGGCTTAG
CAGCTACTGGCGTTGCAGGATATGCATTTTACAAGTACAGAATCCGGAGA
TATATGGATTCAGAGATACGGGCCATCATGGCACAGTACATGCCATTGGA
TAGTCAAGCAGAGGTTCAGCATGCTTCCCACGGTGATGTTTAAGAGCAGG
GCCCGTCGGCCCAGAAAGAAGGGGACAATGTCAGAAGAACATAATGCTCT
ATCCACATCTTACTGATACTATGTGGTGTAATGTTTAATTTATTACCTGG
CTTATATGCTCGGTTAGCGTTACAATTTACTGTGAGTGGAGTTAGTTTAT
TTGTAAATTATTTAAATTATAACCGACGCACATAAATGCCCAGCAGCACA
GTCAATTTTTCATTGAATGGAAACAGTTTTAATGATTACCCAAGTTTCAG
TTCGATGGCTCATTATGTAATGCTGNCCTGGGAGGTCATTCAACTCTTCA
TTTTGTAACTTTCCTCTGTCGTCAATTGGCAATGGTTTGCAGTTTTTATT
ATTATTGGTTACAAGCGGGCGCGTGGTGATCCTGGTGGGGGTAGAGGGGG
GAGGGGGCGGGCCGGGGGCGCGATGCCCGGGTGGTAGTGTGGCGCGGCTG
CTAGCGCGGGTGGGGGGAAGGAGACGTGATGTGGCGGTGCCCTCTGTCTC
AGGGGTGTGGAGGGTGCGCCACGCCTCCAGACCGCGCGACCACCGGGGAG
ATGAAGGGGGGAGGAGAGAGGGAGCGCGGCGGCCNAGGGGGGGCCCGCAG
CACCCTGCCG
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