CV885255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2) HSP 1 Score: 372.089 bits (954), Expect = 2.282e-102 Identity = 171/249 (68.67%), Postives = 208/249 (83.53%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 FD+MV+KY KP L+HYTCVVDLLGR GCLD+AEA+IR+MP+K D +IWKTLLSAC IHK+ +MA R+ +E+L+++P D+A YVLL+N+HASAKRW+ VSE+R++MR++NVKKE G+SW E K +VHQF MGD+S S EI YL+ELT EMKL+GY PDT + +HDMD EEKE +L HSEKLA+AFALM P G PIR++KNLRVCSDCHVA KYIS IKNREI +RD SRFHHF NGKCSCGDYW Sbjct: 402 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.305e-73 Identity = 125/249 (50.20%), Postives = 176/249 (70.68%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M + Y + P +HY C+VDLLGR G L++A L++NMP + D IW TLL A ++H +T++A A+++ + P ++ YVLLSN++AS+ RW V +LR MR++ VKK PG SW+EI+N+ H F++GD+ HP EI +LEEL MK GYV T +HD++ EEKE +++HSE+LA+A+ +M +G PIRV+KNLRVC DCH AIKY++ I R II+RD +RFHHF++G CSCGDYW Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 275.018 bits (702), Expect = 3.797e-73 Identity = 125/249 (50.20%), Postives = 174/249 (69.88%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M +Y L P+ EHY CVVD+L R G L A+ I+ MP+K D ++W+TLLSAC +HK+ ++ A +L+L P D+A YVLLSN++A +K+W R+ M+E+ VKKEPG SW+E+KN +H F +GD++HP + EI Y ++LT GYV D + ++++ +E+K+ + HSEKLAI+F L++ P VPI VMKNLRVC+DCH IK++S + NREIIVRDA RFHHF G CSC DYW Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 8.459e-73 Identity = 125/250 (50.00%), Postives = 181/250 (72.40%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHF-RNGKCSCGDYW 869 FD+MV+ ++ P EH +C+VDL R G L++A +I NMP A + IW+T+L+AC++HK T++ AE+++ + P D+A YVLLSN++A + WQ +++R+ M ERNVKKEPG SW+E+KN+ + F GD+SHP +I + LE+L++ +K GY PDT + D+D+E KE L HSE+LAIAF L+ TP G P+ ++KNLRVC DCH+ IK I+ I+ REI+VRD++RFHHF +G CSCGD+W Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.443e-72 Identity = 120/249 (48.19%), Postives = 177/249 (71.08%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 FD+M ++ P L HY C+VDL GR G L EA+ I MP++ D + W +LLSAC++HK+ D+ AE +L L P ++ Y L+N++++ +W+ +++R++M++ VKKE G SW+E+K++VH F + D +HP EI + ++++ E+K GYVPDT + +HD++ E KE L+HHSEKLAIAF L++TP +R+MKNLRVC+DCH AIK+IS + REIIVRD +RFHHF++G CSC DYW Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 4.198e-72 Identity = 129/254 (50.79%), Postives = 180/254 (70.87%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKE-----PGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ MV+ Y+++P+ +HYTC+VDLLGR G L+EA LIR+MP + ++ TLL AC++HK+ ++A AE++L+LN ++AA YV L+NI+AS RW+ V+ +R+ M+E NV K PG SW+EI+N+VH F D+ HP I L+EL +MKL GY P+ +H+++ E+KE L HSEKLA+AF + P G I+V KNLR+C DCH AIK+IS I+ REIIVRD +RFHHF++G CSCGDYW Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 661
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 7.161e-72 Identity = 120/253 (47.43%), Postives = 180/253 (71.15%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNE----EKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M + +++KP++EHY C+VDLL R G L +A I MP +AD ++W+T L AC++H +T++ A ++L+L+P + A Y+ LSNI+A A +W+ +E+R M+ERN+ KE G SW+E+ +++H+F +GD +HP++ +I L+ L +E+K GYVPDT +H ++ E EKE L HSEK+A+AF L++T P+RV KNLRVC DCH A+KYIS + REI++RD +RFHHF++GKCSC DYW Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.221e-71 Identity = 127/250 (50.80%), Postives = 176/250 (70.40%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNP-RDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M Y + P+ +HY C++DLLGR G EAE L+ MP + D I+W ++L+AC+IHK+ +A R AE++ + RDAA YV +SNI+A+A W+ V ++++AMRER +KK P SW+E+ +++H F+ D++HP+ EI + ELT+E++ GY PDT + + D+D + K +LK+HSE+LA+AFAL++TP G PI VMKNLR C DCH AIK IS I REI VRD SRFHHF G CSCGDYW Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2) HSP 1 Score: 269.626 bits (688), Expect = 1.595e-71 Identity = 126/250 (50.40%), Postives = 174/250 (69.60%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGD-KSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 ++ M + +KP HY C+VD+LGR G +EA +I +M V+ D +W +LL AC+ H D+A A++++++ P ++ Y+LLSN++AS RW V+ELR+ M+ R V+K PG SW E++N+VH FT G SHP I L+EL ++ GY PD +HD+D EEK +LK+HSE+LA+A+AL+ G+PIRVMKNLRVCSDCH AIK IS +K REII+RDA+RFHHFRNG+CSC DYW Sbjct: 456 YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 267.314 bits (682), Expect = 7.917e-71 Identity = 124/249 (49.80%), Postives = 176/249 (70.68%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M ++Y+++PR+EH+ C+VDLL R G + +A I++MP++ + +IW+TLL AC +H +D+A ++L+L P + YVLLSN++AS +RW V ++R+ M VKK PG S +E+ N+VH+F MGDKSHP S I L+E+T ++ GYVP D++ EEKE + +HSEK+AIAF L++TP PI V+KNLRVC+DCH+AIK +S + NREI+VRD SRFHHF+NG CSC DYW Sbjct: 347 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595 The following BLAST results are available for this feature:
BLAST of CV885255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885255 ID=CV885255; Name=CV885255; organism=Citrus sinensis; type=EST; length=870bpback to top |