CX043338

Overview
NameCX043338
Unique NameCX043338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8197 contig Csv1_Contig8197:430..1077. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 7.635e-77
Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = -3
Query:  122 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVMFNL 646
            +GPIGLVTMLAARAFGAPRIV+VDVDD RL++AK++GAD+I++VSTN+QD+ EEV KIQ  M TG+DVSFDC G NKTMSTAL AT AGGKVCLVG+   EMTVPLTPAA REVD+VG+FRY+NTWPLCLE LRSGKIDVKPL+T RF FSQK+VEEAFETSARGG AIKVMFNL
Sbjct:  192 SGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 9.442e-35
Identity = 81/173 (46.82%), Postives = 119/173 (68.79%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGPIGLV++LAA+A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE +   +G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP+ + +L S  ++VKPLVT RF    ++  EAFETS + G  +KVM
Sbjct:  180 AGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVM 346          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.104e-34
Identity = 78/172 (45.35%), Postives = 115/172 (66.86%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGPIGLV +LAA+A GA ++V+ D+   RLS AKE+GAD I+++S    +  E  +K++  +G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP+ + +L S  ++VKPLVT RF    ++  EAFETS + G  +KVM
Sbjct:  178 AGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPE--EIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVM 344          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 145.591 bits (366), Expect = 2.104e-34
Identity = 79/173 (45.66%), Postives = 118/173 (68.21%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGPIG+VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY NTWP+ + +L S  ++VKPLVT RF    ++  EAFET A+ G  +KVM
Sbjct:  181 AGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTWPMAVSMLASKTLNVKPLVTHRFPL--EKAVEAFET-AKKGLGLKVM 347          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 6.120e-34
Identity = 77/173 (44.51%), Postives = 116/173 (67.05%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY NTWP+ + +L S  ++VKPLVT RF    ++  EAFET A+ G  +KVM
Sbjct:  181 AGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTWPMAISMLASKTLNVKPLVTHRFPL--EKAVEAFET-AKKGVGLKVM 347          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.363e-33
Identity = 79/173 (45.66%), Postives = 115/173 (66.47%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE +   +G   +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+ + +L S  ++VKPLVT RF    ++  EAFET  + G  +K+M
Sbjct:  181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.326e-33
Identity = 77/173 (44.51%), Postives = 115/173 (66.47%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE +   +G   +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GVFRY NTWP+ + +L S  ++VKPL+T RF    ++  EAFET  + G  +K+M
Sbjct:  181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.507e-32
Identity = 77/173 (44.51%), Postives = 115/173 (66.47%), Query Frame = -3
Query:  131 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVM 646
            AGPIG+V++L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE +   +G   +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AAVREVD+ GVFRY NTWP+ + +L S  +++KPLVT RF    ++  EAFET  + G  +K+M
Sbjct:  181 AGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNTWPVAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.858e-25
Identity = 68/175 (38.86%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  122 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKEVEEAFETSARGGTAIKVMFNL 646
            AGPIG++  ++A+A GA +I++ DV   RL  A E+GADN++ V     D  E VEKI K +G   DVS D  G       AL  T   G V +VG+    + +PL+ A +REVDVVG FR  NT+   L  + SG I +   +T RF  +  + +EA +  A+ G A+K++ ++
Sbjct:  176 AGPIGILCAMSAKAMGASKIILTDVVQSRLDAALELGADNVLLVRREYTD-EEVVEKIVKLLGDRPDVSIDACGYGSAQRVALLVTKTAGLVLVVGIADKTVELPLSQALLREVDVVGSFRIMNTYQPALAAVSSGAIPLDKFITHRFPLN--KTKEALDL-AKSGAAMKILIHV 346          
BLAST of CX043338 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 3.722e-23
Identity = 57/154 (37.01%), Postives = 95/154 (61.69%), Query Frame = -3
Query:  185 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTPRFGFSQKE 643
            GP+GL+ + AA+AFGA  I++ D++  RL  AK++GA +I+ +    QD  EE++ I      G+DV+++ AG    + +AL +   GGK+ +VG+   +E+ + +   A  E+D+ G+FRY NT+P  +E L SG +D K LVT ++   Q +
Sbjct:  182 GPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINIRE--QDALEEIKTITN--DRGVDVAWETAGNPAALQSALASVRRGGKLAIVGLPSQNEIPLNVPFIADNEIDIYGIFRYANTYPKGIEFLASGIVDTKHLVTDQYSLEQTQ 331          
The following BLAST results are available for this feature:
BLAST of CX043338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
IDND_VITVI7.635e-7779.43L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_BOVIN9.442e-3546.82Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_SHEEP2.104e-3445.35Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_RAT2.104e-3445.66Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_MOUSE6.120e-3444.51Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_HUMAN1.363e-3345.66Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_PONAB2.326e-3344.51Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_MACFA1.507e-3244.51Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_BOMMO8.858e-2538.86Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
DHSO_BACSU3.722e-2337.01Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10D10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10D10-H20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043338 ID=CX043338; Name=CX043338; organism=Citrus sinensis; type=EST; length=648bp
TTTTTTTTTTTTTTTTTACACGGCGACAATTCCATTTTATTTAATCGTTT
GCCCAAACGTTTACATGGCCGTTGTATTGTACAGATTAAACATGACCTTG
ATTGCAGTACATTGTATCTTACAAATTAAACATGACCTTGATTGCAGTAC
CACCACGAGCACTTGTTTCAAAGGCCTCTTCCACTTCTTTCTGGGAAAAA
CCAAACCTGGGCGTGACAAGGGGCTTTACATCAATCTTTCCGCTTCTAAG
CAACTCCAGACACAGGGGCCAGGTATTCTTGTAGCGAAACACCCCCACCA
CATCCACTTCCCTTACAGCAGCTGGAGTGAGTGGGACAGTCATTTCATGA
TGACCCATCCCCACGAGGCAAACTTTACCACCTGCACAAGTGGCGCCCAG
TGCTGTTGACATGGTTTTGTTAAGGCCTGCACAATCAAAGCTCACATCTA
TTCCTGTCCCCATGGCTTTCTGTATCTTTTCCACTTCTTCAGCTATATCC
TGCAAATTTGTTGAAACTTTAACAATATTATCTGCACCAATTTCCTTTGC
AACAGATAAACGATAGTCATCCACATCCACAATGACAATTCTAGGAGCTC
CAAAAGCACGAGCTGCTAGCATTGTGACAAGTCCTATGGGCCCTGCAC
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