CV885251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.395e-69 Identity = 153/234 (65.38%), Postives = 166/234 (70.94%), Query Frame = 2 Query: 14 MEASSACLVGNILTTHKT-KTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLS-EKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 M ASSACLVGN L+ + T K LSK F GR +SF S+ + KV VVKASL +K+ EGRR FLK L+GN GVG L+ SGKA ADEQGVSSSRMSYSRFLEYLDKDRV KVDL+ENGTIAIVEA+SPELGNRV+RVRVQLPGLSQELLQK R KNIDFAAHNAQED GS+LFNLIGN QSKAKFQMEPNTGVTFDD Sbjct: 1 MAASSACLVGNGLSVNTTTKQRLSKHFSGRQ----TSFSSVIRTSKVNVVKASLDGKKKQEGRRDFLKILLGNAGVG--LVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQFGQSKAKFQMEPNTGVTFDD 228
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.228e-66 Identity = 142/234 (60.68%), Postives = 154/234 (65.81%), Query Frame = 2 Query: 14 MEASSACLVGNILTTHKTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLSEKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADEQG--VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 M ASSACL+GN L+ + TK K L++ KV VVKASL EK+HEGRRGF K L+GN G LL SG A ADEQG VSSSRMSYSRFLEYLDK RV+KVDL+ENGTIAIVEA+SPELGNR+QRVRVQLPGLSQELLQK R KNIDFAAHNAQED GS + NLIGN QSKAKFQMEPNTGVTFDD Sbjct: 1 MAASSACLLGNGLSVYTTKQRFQK-------------LGLDRTSKVTVVKASLDEKKHEGRRGFFKLLLGNAAAGVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIGNLAFPVILIGGLFLLSRRSSGGMGGPGGPGFPLQIGQSKAKFQMEPNTGVTFDD 221
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.005e-59 Identity = 126/185 (68.11%), Postives = 135/185 (72.97%), Query Frame = 2 Query: 158 VKASLSEKQHEGRRGFLKKLVGNVGVGT-ALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 V ASL K ++ RR FLK +GN+GVG LLG+ +A A+EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK REKNIDFAAH+ QEDSGSLLFNLIGN QS+AKFQMEPNTGVTFDD Sbjct: 31 VTASLEHKTNDARRKFLKLALGNLGVGLPTLLGAKRALAEEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHSNQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRAQGGLGGPNGPGFPLGFGQSRAKFQMEPNTGVTFDD 215
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.794e-28 Identity = 78/196 (39.80%), Postives = 102/196 (52.04%), Query Frame = 2 Query: 125 RSLEKKPKVAVVKASLSEKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADE-QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 R+ K+ +S SE RR L+ +G+G +A A + V+S+RMSYSRFLEYLD VKKVD FENGT+A+ E +RV RV+VQLPGL EL++K R+K +DFAAH + +G +L +L+ N +SKAKFQMEP TGVTFDD Sbjct: 30 RTTPPPAKITPPSSSSSEAAGLSRRRLLQSAGLGLGLGLTAARPARAEATAPEEVTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVDDAAALSRVHRVKVQLPGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVN---FGFPLLFVASLLWRSPTMNNPGGGPSLPFGLGKSKAKFQMEPKTGVTFDD 222
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 69/160 (43.12%), Postives = 94/160 (58.75%), Query Frame = 2 Query: 233 VGTALLGSGKAYADEQ-GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 +GT L KA + +S+RMSYSRFL++L ++ VKKVDL ENGT+AIVE +P +G ++QRVRV LPGL +L+++ +EKN+DFAAH + G+ L N +GN +SKAKFQMEPNTG+TF+D Sbjct: 71 LGTVLAHPAKAEPEAPIEATSNRMSYSRFLQHLKENEVKKVDLIENGTVAIVEISNPVVG-KIQRVRVNLPGLPVDLVREMKEKNVDFAAHPMNVNWGAFLLNFLGN----LGFPLILLVSLLLTSSSRRNPAGPNLPFGLGRSKAKFQMEPNTGITFED 225
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 278 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 + ++SSRM+Y RFLEYLD VKKVDL++ G AIVEAI PELGNR+QR+RV+LP + EL+ K R+ N+D AH + + + ++LIGN +SKA+FQME TGVTF+D Sbjct: 36 KNIASSRMTYGRFLEYLDLGWVKKVDLYDEGHTAIVEAIGPELGNRIQRIRVELPATAPELITKLRKANVDLDAHATNDSTPA--WSLIGN---LIFPILLIAGLAFLFRRSSNLPGGPGQAMNFGKSKARFQMEAKTGVTFND 174
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 62/142 (43.66%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 284 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 ++SSRM+Y RFLEYLD VK+VDL+EN AIVEA+ PELGNRVQR+RV+LP + EL+ K R+ N+D AH + S S ++ L+GN +SKA FQME TGV F+D Sbjct: 38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPK--STSAVWGLLGN---LLFPLILVGGLAFLFRRSNNASGGPGQAMSFGKSKALFQMEAKTGVVFND 174
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 62/142 (43.66%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 284 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 ++SSRM+Y RFLEYLD VK+VDL+EN AIVEA+ PELGNRVQR+RV+LP + EL+ K R+ N+D AH + S S ++ L+GN +SKA FQME TGV F+D Sbjct: 38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPK--STSAVWGLLGN---LLFPLLLVGGLAFLFRRSNNASGGPGQAMSFGKSKALFQMEAKTGVVFND 174
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17 Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 284 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 V SS+M+Y RFLEYL+ V +VDL++N AIV+A SPELGNR Q +RV++P + +L+QK +E NIDF AH A++ ++ N++ N +S A+F+ P+TGV+F D Sbjct: 50 VISSKMTYGRFLEYLEMGWVNQVDLYDNSRNAIVQASSPELGNRPQTIRVEIPVGASQLIQKLKEYNIDFDAHPAEQK--NIFVNILSN--ILLPIIFITGLVYLFQNSENFGGGSGQSPMSLGKSTARFERRPDTGVSFKD 187
BLAST of CV885251 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16 Identity = 51/141 (36.17%), Postives = 71/141 (50.35%), Query Frame = 2 Query: 287 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDD 709 SSSRM+Y RFLEY+D + VKKVDL++N AIV+ I+P++ Q VRV+LP S EL+ K + K IDF AH + + NL+ ++KA+F ME TG+ F+D Sbjct: 37 SSSRMTYGRFLEYIDMNWVKKVDLYDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVSKLKNKLIDFDAHPSSSN-----VNLVSWLSNLLLPLILIITLFFFFRRGNKSSSGPGQAFNFGKAKARFHMEAKTGIVFED 172 The following BLAST results are available for this feature:
BLAST of CV885251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885251 ID=CV885251; Name=CV885251; organism=Citrus sinensis; type=EST; length=710bpback to top |