CV885244

Overview
NameCV885244
Unique NameCV885244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.830e-84
Identity = 160/227 (70.48%), Postives = 175/227 (77.09%), Query Frame = -3
Query:  213 PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFFAVGASQADAAKN 893
            PGVKRAL+VGVG+QILQQ SGINGVLYYTPQILEQAGVG+                  +TT +MLP+IAVAMRLMD+SGRR                      + M S+VHA +STVSVVLYFC FVMGFGP PNILCSEIFPTRVRGICIAICAL FWI DIIVTYSLPVLL S+GLAGVFGMYA+VC ISW+FVFIKVPETKGMPLEVITEFF+VGA QA+AAKN
Sbjct:  502 PGVKRALVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMNSIVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFFSVGARQAEAAKN 728          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.939e-76
Identity = 149/225 (66.22%), Postives = 170/225 (75.56%), Query Frame = -3
Query:  222 PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFFAVGA-SQADA 893
            PGVKRAL+VGVGIQILQQ SGINGVLYYTPQILE+AGV +                  +TTLLMLP+I VAMRLMD+SGRR                      I +  VV+A++ST  VVLYFC FVMG+GPIPNILCSEIFPTRVRG+CIAICA+VFWIGDIIVTYSLPVLL+S+GL GVF +YA VCVISWIFV++KVPETKGMPLEVIT++FA GA +QA A
Sbjct:  505 PGVKRALVVGVGIQILQQFSGINGVLYYTPQILERAGVDILLSSLGLSSISASFLISGLTTLLMLPAIVVAMRLMDVSGRRSLLLWTIPVLIVSLVVLVISELIHISKVVNAALSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITDYFAFGAQAQASA 729          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.257e-67
Identity = 130/225 (57.78%), Postives = 157/225 (69.78%), Query Frame = -3
Query:  219 PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFFAVGASQADAA 893
            PGVKRALMVGVG+QILQQ +GINGV+YYTPQILE+ GV                    +TTLLMLP I V+MR + +S                         + +G  ++A IST SV +Y  CFVMGFG IPNILCSEIFPT VRG+CI ICAL FWI DIIVTY+LPV+L S+G+AGVFG+YA+VC ++W+FV++KVPETKGMPLEVI+EFF+VGA Q DAA
Sbjct:  506 PGVKRALMVGVGLQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSMRSLMLS--------TIPILILSLVTLVIGSLVNLGGSINALISTASVTVYLSCFVMGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKGMPLEVISEFFSVGAKQQDAA 722          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.135e-19
Identity = 64/207 (30.92%), Postives = 102/207 (49.28%), Query Frame = -3
Query:  261 RALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVI 881
            +AL++G G+ + QQ++G   VLYY P IL+ AG                        LL L    VA+ ++D  GRR                          S V   ++ V+++LY  C+ + FGPI  ++ SEIFP ++RG  +++  LV +  + +VT++   L   +G   +F  + V+CV+S +F+F  VPETKG+ LE I
Sbjct:  304 KALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDATRVSILLG---------LLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPV---VAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLTLEEI 498          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19
Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = -3
Query:  261 VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVI 887
            ++  L++GVG+ I QQ  GIN V+YY P I  +AG+G                      +L +     AM L+D  GR+                          S   A ++ V + +Y   +   +GP+  +L  E+FP++ RG       LV    ++IV+   P++L+++G+A VF +++V+C++S+ F F  VPETKG  LE I
Sbjct:  239 IRPMLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASALGTMGIG----------ILNVIMCITAMILIDRVGRKKLLIWGSVGITLSLAALSGVLLTLGLSASTAWMTVVFLGVYIVFYQATWGPVVWVLMPELFPSKARGAATGFTTLVLSAANLIVSLVFPLMLSAMGIAWVFMVFSVICLLSFFFAFYMVPETKGKSLEEI 437          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.936e-19
Identity = 64/214 (29.91%), Postives = 101/214 (47.20%), Query Frame = -3
Query:  261 PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHASISTVS---VVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVI 893
            P   ++L+VGVG+ +LQQ  G+NG+ +Y   I E AGV                       ++ +P   + + LMD SGRR                      ++    +    S ++   V++Y   F +G G IP ++ SEIFP  ++G   ++  +V W+G  I++++   L+N    AG F ++A VC  + IFV   VPETKG  LE I
Sbjct:  262 PQYAKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAGVS-------------SKIGMIAMVVVQIPMTTLGVLLMDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGIPWVIMSEIFPIDIKGSAGSLVTVVSWVGSWIISFTFNFLMN-WNPAGTFYVFATVCGATVIFVAKLVPETKGRTLEEI 461          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 9.610e-19
Identity = 66/236 (27.97%), Postives = 99/236 (41.95%), Query Frame = -3
Query:  249 PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMG---------------------SVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFF 893
            PG+ +  ++GV +   QQLSG+N V++Y   I E+A                      +  ++ +   AVA  +MD +GRR                      +  G                     SV  A ++  S+ L+   F +G+GPIP +L SEIFP  V+G+   IC L  W+   +VT     L+  +   G F + +  C+ S +F    VPETKG  LE IT  F
Sbjct:  251 PGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIFEEA------------KFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHF 474          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.255e-18
Identity = 67/217 (30.88%), Postives = 101/217 (46.54%), Query Frame = -3
Query:  249 LMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIK--------MGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFF 875
            LMVG+G+ +LQQL GINGVL+Y+  I E AGV                        + + + A++  L+D +GRR                      +K        M S + + +S V VV     F +G GPIP ++ SEI P  ++G+  +I  L  W    ++T +  +LL +    G F +Y +VC  + +FV + VPETKG  LE +   F
Sbjct:  284 LMVGIGLLVLQQLGGINGVLFYSSTIFESAGV------------TSSNAATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWL-SILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMTANLLL-AWSSGGTFTLYGLVCAFTVVFVTLWVPETKGKTLEELQSLF 486          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18
Identity = 68/217 (31.34%), Postives = 102/217 (47.00%), Query Frame = -3
Query:  249 LMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIK--------MGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFF 875
            LMVG+G+  LQQL GINGVL+Y+  I E AGV                       ++ + +  +A  L+D +GRR                      +K        M +++ + +S V VV       +G GPIP ++ SEI P  ++G+  +I  L+ W    +VT +  +LL +    G F +YA+VC  + +FV + VPETKG  LE I   F
Sbjct:  285 LMVGIGLLALQQLGGINGVLFYSSTIFESAGV------------TSSNVATFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNIL-SMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMTANMLL-AWSSGGTFTLYALVCGFTVVFVSLWVPETKGKTLEEIQALF 487          
BLAST of CV885244 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.796e-18
Identity = 61/235 (25.96%), Postives = 98/235 (41.70%), Query Frame = -3
Query:  249 PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXITTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXIKMGSVVHAS--------------------ISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITEFF 893
            PG+ + L++G+ + + QQLSG+N +++Y   I E+A                         ++ +   AVA  +MD +GRR                      +      ++S                    ++  S+ L+   F +G+GPIP +L SEIFP  V+G+   IC L  W    +VT     ++  +   G F + A  C +S +F    VPETKG  LE +T  F
Sbjct:  252 PGIYKPLIIGISLMVFQQLSGVNAIMFYANSIFEEA------------KFKDSSLASVTVGIIQVLFTAVAALIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVTAHF 474          
The following BLAST results are available for this feature:
BLAST of CV885244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
MSSP2_ARATH3.830e-8470.48Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
MSSP1_ARATH2.939e-7666.22Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
MSSP3_ARATH3.257e-6757.78Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
XYLL2_ARATH1.135e-1930.92D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
CSBC_BACSU1.483e-1929.19Probable metabolite transport protein csbC OS=Baci... [more]
ERDL5_ARATH1.936e-1929.91Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]
GTR8_HUMAN9.610e-1927.97Solute carrier family 2, facilitated glucose trans... [more]
ERDL6_ARATH1.255e-1830.88Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
ERDL4_ARATH2.141e-1831.34Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
GTR8_MOUSE2.796e-1825.96Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013E06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885244 ID=CV885244; Name=CV885244; organism=Citrus sinensis; type=EST; length=895bp
CTTTTTTTTTACCGAGAAACATTCAGTCATTTCAACATTAAAACAAACTA
ATGGGAACAAAAAAATGTAATACTTTCTACAAAAATCAAAGCATCCTGTT
TTCCAACAACCTAGAAGAAAGCACAAAGAGAGCTGGAAGTAAAATAAAAT
AAAATAAGAAAAAAAAAATTGAACTTCCGCCAAAACTTTCAATGTCAATG
ACCACGTCAGTTGTTCTTGGCAGCATCAGCCTGGCTTGCACCAACGGCGA
AGAACTCTGTAATCACTTCAAGCGGCATGCCCTTTGTTTCTGGAACTTTG
ATGAAGACGAATATCCATGATATGACACAAACGACAGCGTACATACCAAA
AACACCAGCAAGGCCAACGGAGTTGAGCAGTACTGGGAGTGAATAGGTGA
CAATGATGTCACCTATCCAAAATACAAGGGCACATATGGCAATGCAGATG
CCACGTACCCTGGTGGGGAAGATCTCCGAACAGAGTATGTTAGGGATTGG
CCCAAAACCCATGACAAAGCAACAGAAATATAACACAACACTGACAGTCG
AGATTGATGCATGCACAACAGAACCCATCTTTATAACACTTGACAGGACT
AGGACAACAAGAGATGTTATTAAGATGGGGATTGTGCTGAGCAGCAAAGT
CCTTCTGCCAGAAATATCCATGAGCCTCATGGCTACAGCTATAGATGGAA
GCATCAATAAGGTTGTGATGCCACTGATAAGCAGTGATGCTGAAGCTGAA
CTAATGCCCAAATTTGAAAGAAGAACTCCAACACCTGCCTGCTCAAGAAT
TTGAGGAGTGTAGTAGAGAACCCCATTTATGCCAGATAACTGCTGAAGTA
TTTGAATGCCCACACCCACCATCAATGCACGTTTAACTCCTGGTT
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