CV885243

Overview
NameCV885243
Unique NameCV885243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885243 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 6.953e-87
Identity = 168/270 (62.22%), Postives = 194/270 (71.85%), Query Frame = 1
Query:    1 LVSKGRMLEAKKVLQSLRGREDVAGEMAXXXXXXXXXXXXXXXXYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGS--------MVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVG-MGIGGGWQLAWKWSXXXXXXXXXXXXXXRIYLHQEGVPASHRGSFISMHGED 783
            LVSKGRMLEAK+VLQ LRGREDV+GEMA                YIIGPA+++  D DI+ DKDQIKLYG EEGLSW+ARPV G S + + SRHGS        ++DPLVTLFGSVHEK+PD GSMRS LFPHFGSMFSVGGNQPR+E+WDEE+LV EG++YPSD  G DS+D+L SPLISRQTTS+EKDM   AHGTLS+ RHGSQVQG  GE  G MGIGGGWQ+AWKW+                   +EG P S RGS +S+ G D
Sbjct:  192 LVSKGRMLEAKRVLQRLRGREDVSGEMALLVEGLGIGGETTIEEYIIGPADEVTDDHDIAVDKDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKMPDTGSMRSALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSD-HGDDSEDDLHSPLISRQTTSMEKDMPHTAHGTLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQ----------KEEGFPGSRRGSIVSLPGGD 450          
BLAST of CV885243 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.777e-46
Identity = 119/279 (42.65%), Postives = 150/279 (53.76%), Query Frame = 1
Query:    1 LVSKGRMLEAKKVLQSLRGREDVAGEMAXXXXXXXXXXXXXXXXYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSM-------VDPLVTLFGSVHEKLPDQ---GSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGE-PVGMGIGGGWQLAWKWS-XXXXXXXXXXXXXXRIYLHQE-------GVPASHRGSFISMHGE 780
            LVSKGRM EA++VLQ LRGREDV+GE+A                Y+IGP N+     +    KDQIKLYGPE+G SW+A+PV GQS + L SR GSM       +DPLVTLFGS+HE LP +    S RS LFP+ GS+  + G Q    +WD E          ++    D D+NL SPL+S QTT  + D      GT+   R  S    N GE      IGGGWQLAWK++               R+Y+H+E        +P S RGS +S H E
Sbjct:  192 LVSKGRMDEARQVLQRLRGREDVSGELALLVEGLGVGKDTSIEEYVIGPDNEENEGGNELPRKDQIKLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLPSENMNASSRSMLFPNMGSILGMMGRQ--ESQWDPER---------NNEDSSDQDENLNSPLLSPQTTEPD-DYHQRTVGTM-HRRQSSLFMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTNNIPFSRRGSLLSFHPE 457          
BLAST of CV885243 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 8.599e-45
Identity = 125/286 (43.71%), Postives = 164/286 (57.34%), Query Frame = 1
Query:    1 LVSKGRMLEAKKVLQSLRGREDVAGEMAXXXXXXXXXXXXXXXXYIIGPANDLAADQDISADKD-QIKLYGPEEGLSWIARPVTGQ-SIVGLGSRHGSMV-------DPLVTLFGSVHEKLPDQ-GSMRSTLFPHFGSMFSVGGNQPRNE--EWD---EESLVREGDEYPSDAAGGDSDD---NLQSPLISRQTTSIEKDMVP-PAHG-TLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSXXXXXXXXXXXXXXRIYLHQEGVPASHRGSFISMHGEDVPVGG 798
            LVSKGRM EAK+VLQ L GREDV  EMA                 ++   +    D   + D+D Q++LYG  E  S++ARPV  Q S +GL SRHGS+        DPLV LFGS+HEK+P+  G+ RS +FPHFGSMFS   + P  +   W+   E    ++ D+Y +D   GD DD   +L+SPL+SRQTTS++KDM+P P  G TLS  RH + +QGN GE   MGIGGGW + +++               R YL ++G   S RGS IS+ G   P GG
Sbjct:  190 LVSKGRMDEAKRVLQQLCGREDVTDEMALLVEGLDIGGEKTMEDLLVTLEDHEGDDTLETVDEDGQMRLYGTHENQSYLARPVPEQNSSLGLRSRHGSLANQSMILKDPLVNLFGSLHEKMPEAGGNTRSGIFPHFGSMFSTTADAPHGKPAHWEKDIESHYNKDNDDYATDDGAGDDDDSDNDLRSPLMSRQTTSMDKDMIPHPTSGSTLSMRRHSTLMQGN-GES-SMGIGGGWHMGYRYE---------NDEYKRYYLKEDGA-ESRRGSIISIPGG--PDGG 461          
The following BLAST results are available for this feature:
BLAST of CV885243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MSSP2_ARATH6.953e-8762.22Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
MSSP3_ARATH7.777e-4642.65Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
MSSP1_ARATH8.599e-4543.71Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013E06_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885243 ID=CV885243; Name=CV885243; organism=Citrus sinensis; type=EST; length=803bp
CTTGTGAGTAAAGGGCGCATGCTTGAGGCCAAGAAGGTTTTGCAGAGTTT
GCGTGGTAGAGAAGATGTTGCTGGTGAGATGGCTTTACTGGTTGAGGGAC
TTGGTGTTGGGGGTGAAACATCTTTAGAGGAGTACATAATTGGTCCGGCC
AATGACCTTGCTGCTGATCAGGACATATCTGCTGATAAAGATCAAATCAA
ACTATATGGGCCTGAAGAAGGTCTCTCCTGGATTGCTAGACCAGTCACTG
GACAGAGTATTGTTGGTCTAGGGTCTAGGCATGGAAGTATGGTGGATCCT
CTTGTCACCCTTTTTGGCAGCGTGCACGAGAAGCTTCCTGATCAGGGAAG
CATGCGAAGCACGCTATTTCCTCACTTTGGCAGCATGTTTAGTGTGGGAG
GAAATCAACCTAGAAATGAAGAGTGGGATGAGGAGAGCCTTGTCAGAGAG
GGTGACGAATATCCATCTGATGCTGCTGGTGGTGACTCTGATGACAATTT
GCAGAGCCCATTGATCTCCCGCCAGACGACAAGTATCGAGAAGGACATGG
TTCCACCTGCCCATGGTACCCTTTCAAGCATGAGACACGGCAGTCAGGTG
CAAGGAAATGCTGGAGAACCAGTTGGTATGGGGATTGGTGGAGGTTGGCA
GTTAGCATGGAAATGGTCTGAAAAGGAGGGCCGAGATGGAAAGAAAGAAG
GAGGATTCAAAAGAATCTACTTGCACCAGGAGGGTGTCCCTGCATCTCAT
CGTGGATCCTTTATTTCTATGCATGGTGAGGATGTTCCTGTAGGAGGTGA
GGT
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