CV885235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 8.510e-64 Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = -1 Query: 457 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 969 R+ F+GCP +T TI+LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI+ME+SKYLR SR I GK Q I +YAKALE+IPRQLCDNAGFDAT++LNKLR +HA G YGVDINT IAD+F FVWEPA+V+INA+ AA+EAACLI+SVDET+KNP+ Sbjct: 357 RYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA---QGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPR 524
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.476e-63 Identity = 119/171 (69.59%), Postives = 141/171 (82.46%), Query Frame = -1 Query: 457 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 969 R+ F+GCP +T TI+LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI+ME+SKYLR SR I GK Q I +YAKALE+IPRQLCDNAGFDAT++LNKLR +HA G YGVDIN IAD+F FVWEPA+V+INA+ AA+EAACLI+SVDET+KNP+ Sbjct: 357 RYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA---QGGMWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKNPR 524
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.204e-63 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = -1 Query: 457 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 969 R+ F+GCP +T T +LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI+ME+SKYLR SR I GK Q I +YAKALE+IPRQLCDNAGFDAT++LNKLR +HA G YGVDIN IAD+F FVWEPA+V+INA+ AA+EAACLI+SVDET+KNP+ Sbjct: 357 RYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA---QGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPR 524
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 7.204e-63 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = -1 Query: 457 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 969 R+ F+GCP +T T +LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI+ME+SKYLR SR I GK Q I +YAKALE+IPRQLCDNAGFDAT++LNKLR +HA G YGVDIN IAD+F FVWEPA+V+INA+ AA+EAACLI+SVDET+KNP+ Sbjct: 357 RYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA---QGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPR 524
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 9.409e-63 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = -1 Query: 457 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 969 R+ F+GCP +T TI+LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI+ME+SKYLR SR I GK Q I +YAKALE+IPRQLCDNAGFDAT++LNKLR KHA G YGVD+N IAD+F VWEPA+V+INA+ AA+EAACLI+SVDET+KNP+ Sbjct: 357 RYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRAKHA---QGGMWYGVDVNNEDIADNFEACVWEPAIVRINALTAASEAACLIVSVDETIKNPR 524
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.719e-56 Identity = 111/169 (65.68%), Postives = 140/169 (82.84%), Query Frame = -1 Query: 463 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 969 R+ +F+GC +TATI+LRGG +QFI+EAERSLHD+IMIVRRA K+ +VVAGGGAI+ME+SKYLR S +I GK Q IN++AKALEVIPRQ+ DNAGFD+TD+LN+LRQKHA GE +GVDI GI D++ + +WEP++VK+N+I AATEA CLILSVDETV+N Sbjct: 357 RYNLFTGCTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEMEVSKYLRDYSLSIEGKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLRQKHA--QGE-KWFGVDIVNEGICDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQN 522
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.114e-55 Identity = 109/170 (64.12%), Postives = 137/170 (80.59%), Query Frame = -1 Query: 463 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 969 RF +F GCP +T T++LRGGADQFI E ERSLHDAIMIV+ A KN+ VVAGGGA +ME+SKYLR S I+GK Q FI ++A++LEVIPRQLCDNAGFD+T++LNKLR +HA +G + GVD+++ G+A++F FVWEP+ VK NAI +ATEAA LILSVDET+KN Sbjct: 362 RFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHA----KGEMWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIKN 527
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 2.101e-54 Identity = 106/172 (61.63%), Postives = 133/172 (77.33%), Query Frame = -1 Query: 457 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDIN-TGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 969 R+ +F CP ++ATI+LRGGA+QFI EAERSL+DAIMIVRR K + +V GGGAI++EIS+ LR SR GK Q IN++AKALEVIP+ + DNAG D+ VLNKLRQKHAL + + +GVDIN GI ++F NFVWEP +V+ NA +AATEAAC ILS+DETV+NPK Sbjct: 357 RYNLFQDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISRLLRLHSRKTEGKVQLVINAFAKALEVIPKTIADNAGHDSIQVLNKLRQKHALESDQSKNFGVDINAVDGIGNNFENFVWEPIIVRKNAFSAATEAACTILSIDETVRNPK 528
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.584e-54 Identity = 108/169 (63.91%), Postives = 131/169 (77.51%), Query Frame = -1 Query: 463 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 969 R+ +F GCP +T T++LRGGA+Q I E ERSLHDAIMIV+RA +N +VAGGGA +ME+SK LR S+ IAGK Q IN++AKALEVIPRQLC+NAGFDA ++LNKLR H+ GE YGV T I D+FA FVWEPA+VKINA+N+ATEA LILSVDET+ N Sbjct: 361 RYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHS--KGE-KWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITN 526
BLAST of CV885235 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 3.041e-45 Identity = 94/170 (55.29%), Postives = 123/170 (72.35%), Query Frame = -1 Query: 460 RFYIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 969 R+ IF C ++ TI+LRGGA QFIEE ERS++DAIMIV R NS +V G G+I+M++SKYLR SR+I K Q + S+AKALE IPR L NAG+D+TD+LNKLR+KH+ T + YGVD G I +++ N ++E +K N I +ATEAACLILS+DET+KNP Sbjct: 359 RYNIFKECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYSRSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSEQTSD-IWYGVDCMEGDIINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETIKNP 527 The following BLAST results are available for this feature:
BLAST of CV885235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885235 ID=CV885235; Name=CV885235; organism=Citrus sinensis; type=EST; length=969bpback to top |