CV885232

Overview
NameCV885232
Unique NameCV885232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.000e-82
Identity = 147/172 (85.47%), Postives = 154/172 (89.53%), Query Frame = -1
Query:  272 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 787
            MPNP+VFFDM+VGGQPAGRIVMELFAD TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQ           GESIYG+KFADENF+KKHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRT K VV+ DCGQLS
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.858e-79
Identity = 140/171 (81.87%), Postives = 151/171 (88.30%), Query Frame = -1
Query:  275 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 787
            M NPKVFFD+T+GG PAGR+VMELFAD TP+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVIPGFMCQ           GESIYG+KF DENFVKKHTGPGILSMANAGPGTNGSQFF+CTAKTEWL+GKHVVFGQVVEGMDV+K  E VGSSSGR +KPVVIADCGQL
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.609e-77
Identity = 133/172 (77.33%), Postives = 149/172 (86.63%), Query Frame = -1
Query:  272 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 787
            M NPKVFFDM + G PAGRIVMEL+AD TPRTAENFRALCTGEKG+G+SGKPLHYKGS+FHRVIP FMCQ            ESIYG+KFADENF+K+HTGPGILSMANAG GTNGSQFF+CT KTEWLDGKHVVFG+V+EGM+VV+ IEKVGS SG+T++PV IADCGQLS
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.307e-76
Identity = 136/170 (80.00%), Postives = 147/170 (86.47%), Query Frame = -1
Query:  272 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 781
            NPKV+FDMTVGG+ AGRIVMEL+AD TP TAENFRALCTGE+GIGK GKPLHYKGSSFHRVIP FMCQ           GESIYGSKF DENF+KKHTGPGILSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVVEG++VV+ IEKVGS SGRT+KPVVIADCGQ+S
Sbjct:    4 NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.736e-75
Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = -1
Query:  272 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 781
            +PKVFFDMT+GG PAG+IVMEL+ D TP+TAENFRALCTGEKG+G+SGKPLH+KGSSFHRVIP FMCQ           GESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEK+GSSSG+  KPVVIADCG++S
Sbjct:    4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.186e-75
Identity = 134/172 (77.91%), Postives = 146/172 (84.88%), Query Frame = -1
Query:  272 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 787
            M  PKV+FDMT+ GQPAGRIVMEL+ D TPRTAENFRALCTGEKG+G +GKPLH+KGS FHRVIP FMCQ           GESIYGSKF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEKVGSSSG+  KPVV+ADCGQLS
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.290e-72
Identity = 133/171 (77.78%), Postives = 141/171 (82.46%), Query Frame = -1
Query:  275 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 787
            M NPKV+FDMTVG + AGRIVMEL+AD  P TAENFRALCTGE+GIGKSGKPLHYKGS+FHRVIP FMCQ           GESIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+ IEKVGS SGRT+K VV  DCGQL
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.200e-72
Identity = 130/172 (75.58%), Postives = 143/172 (83.14%), Query Frame = -1
Query:  272 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 787
            M NP+VFFDM++ G P GRI MELFAD TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQ           GESIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+CT KT WLDGKHVVFGQVV+G+DVVKAIEKVGS SG+T+K V I DCGQLS
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.862e-71
Identity = 129/172 (75.00%), Postives = 142/172 (82.56%), Query Frame = -1
Query:  272 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 787
            M NP+VFFDMTVGG PAGRIVMEL+A+  P+TAENFRALCTGEKG+GKSGKPLHYKGS+FHRVIP FMCQ           GESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVVKAIEKVG+ +G T+K V +ADCGQLS
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
BLAST of CV885232 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.608e-68
Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = -1
Query:  275 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 787
            M NPKVFFD+ +G   AGR+VMELFADVTPRTA NFRALCTGE GIGK+GK LHYKGS+FHR+IPGFMCQ           GESIYGSKF DENF  KHTGPGILSMAN+GP TNGSQFF+CT KT WLDGKHVVFG+VV+G +VVKA+E VGS  G  ++ VVI DCG+L
Sbjct:    1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171          
The following BLAST results are available for this feature:
BLAST of CV885232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYPH_CATRO4.000e-8285.47Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC1.858e-7981.87Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU6.609e-7777.33Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH7.307e-7680.00Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP19B_ARATH4.736e-7577.06Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP18C_ARATH6.186e-7577.91Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYPH_BRANA1.290e-7277.78Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18D_ARATH2.200e-7275.58Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_MAIZE1.862e-7175.00Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP19C_ARATH5.608e-6871.93Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013D12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885232 ID=CV885232; Name=CV885232; organism=Citrus sinensis; type=EST; length=808bp
GAAATTTAAAAAACATAAAAAAGGATATGTAATATAACAAGACAAGCCCT
ATCTTATTTAAAAAGGCAGCTCATAGAAAGACATAAAAAACAGTTCATCA
AGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAACATAGCAGGA
AAATTAGATAAAGATTAAAAGTCCTACAGACACGGCCACATAATAATAGA
TAACATAATCACCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGA
TCATTATCATGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGA
CGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTG
ACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATC
GAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTC
CGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTC
ACGAAGTTCTCATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGT
TCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCA
CACGGTGGAAGGACGAGCCCTTGTAGTGGAGTGGCTTGCCGGACTTGCCG
ATGCCTTTCTCGCCGGTGCAGAGGGCGCGGAAGTTCTCGGCGGTTCGGGG
GGTGACATCGGCGAAGAGCTCCATCACGATCCTGCCGGCGGGCTGACCGC
CGACGGTCATGTCGAAGAACACTTTGGGGTTTGGCATTTTTGATTGGTTG
ATTGGAGA
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