CV885227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885227 vs. ExPASy Swiss-Prot
Match: ATL2B_ARATH (RING-H2 finger protein ATL2B OS=Arabidopsis thaliana GN=ATL2B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = -3 Query: 269 EQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 421 E + CS+CLQD +GE RSLPHCHH FHL C+D WL+RHGSCP+CRRD+ Sbjct: 191 ENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
BLAST of CV885227 vs. ExPASy Swiss-Prot
Match: ATL4M_ARATH (RING-H2 finger protein ATL4M OS=Arabidopsis thaliana GN=ATL4M PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.975e-17 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = -3 Query: 269 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 406 CS+CLQD +GE RSLPHCHH FHL C+D WL RHGSCP+CRRD+ Sbjct: 191 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
BLAST of CV885227 vs. ExPASy Swiss-Prot
Match: ATL1Q_ARATH (RING-H2 finger protein ATL1Q OS=Arabidopsis thaliana GN=ATL1Q PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 8.855e-17 Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = -3 Query: 269 QSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 418 Q + C+ICLQDI GE+ RSLP C HTFHL CVDKWLIRHGSCP+CR+ V Sbjct: 172 QVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
BLAST of CV885227 vs. ExPASy Swiss-Prot
Match: ATL5P_ARATH (RING-H2 finger protein ATL5P OS=Arabidopsis thaliana GN=ATL5P PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.365e-16 Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = -3 Query: 275 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 406 CS+CLQD VGE RSLPHCHH FHL C+DKWL RH SCP+CRR Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRR 219
BLAST of CV885227 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.260e-11 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = -3 Query: 269 QSSC-----CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 418 Q SC CSICL +++ G+ AR LP C+H+FH+ C+D W H +CP+CR V Sbjct: 118 QDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172 The following BLAST results are available for this feature:
BLAST of CV885227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885227 ID=CV885227; Name=CV885227; organism=Citrus sinensis; type=EST; length=567bpback to top |