CV885225

Overview
NameCV885225
Unique NameCV885225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 5.749e-104
Identity = 199/249 (79.92%), Postives = 213/249 (85.54%), Query Frame = -1
Query:   14 RATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 760
            R  DP   +    KTKTLLN+ISGE RDGEIMAVLGASGSGKSTLIDALANRIAK SLKGT+KLNGE L+SRMLKVISAYVMQDDLLF MLTVEETLMFAAEFRLPR+L KSKKK+RVQALIDQLG+RNAAKT+IGD                 IDIIHDPILLFLDEPTSGLDSTSA+MVVKVL+RIAQSGSIVIMSIHQPS+R+LGLLDR+IFLSRG TVYSGSP +LP FF EFG PIPENENRTE
Sbjct:   92 RTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRFFTEFGSPIPENENRTE 340          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.261e-100
Identity = 192/245 (78.37%), Postives = 206/245 (84.08%), Query Frame = -1
Query:   14 PVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 748
            P  G ++   TK LLN ISGEAR+GE+MAVLGASGSGKSTLIDALANRI+KESL+G I LNGEVLES + KVISAYVMQDDLLF MLTVEETLMF+AEFRLP +LSK KKK RVQALIDQLGLRNAAKTVIGD                  DIIHDPI+LFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLD++IFLSRG TVYSGSP +LP FF EFGHPIPENEN+ E
Sbjct:  113 PFDGNDMEMNTKVLLNGISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDKLIFLSRGNTVYSGSPTHLPQFFSEFGHPIPENENKPE 357          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.499e-99
Identity = 188/238 (78.99%), Postives = 209/238 (87.82%), Query Frame = -1
Query:   14 FSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 727
            FSKTKTLL++ISGE RDGEI+AVLGASGSGKSTLIDALANRIAK SLKGT+ LNGE L+SRMLKVISAYVMQDDLLF MLTVEETLMFAAEFRLPR+L KSKKK+RVQALIDQLG+RNAAKT+IGD                 IDIIHDPI+LFLDEPTSGLDSTSA+MVVKVL+RIA+SGSI+IMSIHQPS+R+L LLDR+IFLSRG TV+SGSP +LP FF  FG+PIPENEN+TE
Sbjct:  101 FSKTKTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGSPASLPSFFAGFGNPIPENENQTE 338          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.568e-99
Identity = 189/242 (78.10%), Postives = 206/242 (85.12%), Query Frame = -1
Query:   14 GENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 739
            G +    TK LLN ISGEAR+GE+MAVLGASGSGKSTLIDALANRIAK+SL+G+I LNGEVLES M KVISAYVMQDDLLF MLTVEETLMF+AEFRLPR+LSK KKK RVQALIDQLGLR+AAKTVIGD                  DIIHDPI+LFLDEPTSGLDSTSAYMV+KVLQRIAQSGSIVIMSIHQPSYRI+GLLD++IFLS+G TVYSGSP +LP FF EF HPIPENEN+TE
Sbjct:  123 GNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSPTHLPQFFSEFKHPIPENENKTE 364          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 9.497e-99
Identity = 192/250 (76.80%), Postives = 211/250 (84.40%), Query Frame = -1
Query:   14 ATDP-VPGENLFS-KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 757
            ++DP  P E +FS KTKTLLN I+GEARDGEI+AVLGASGSGKSTLIDALANRIAK SLKG + LNGEVL S+M K ISAYVMQDDLLF MLTVEETLMFAAEFRLPR+LSKSKK +RVQALIDQLGLRNAA TVIGD                 IDIIHDPILLFLDEPTSGLDSTSA  V+KVL+RIAQSGS+VIM++HQPSYR+L LLDR++FLSRGQTV+SGSP  LP FF EFGHPIPE+ENRTE
Sbjct:   90 SSDPGAPSEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQSGSMVIMTLHQPSYRLLRLLDRLLFLSRGQTVFSGSPAMLPRFFAEFGHPIPEHENRTE 339          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.223e-89
Identity = 172/238 (72.27%), Postives = 200/238 (84.03%), Query Frame = -1
Query:   14 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE-VLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 724
            +  KTLL+DI+GEARDGEI+AVLG SG+GKSTLIDALA R+A++SLKGT+ LNGE VL+SR+LKVISAYVMQDDLLF MLTV+ETLMFA+EFRLPR+L KSKK  RV+ LIDQLGLRNAA TVIGD                 IDIIHDPILLFLDEPTSGLDST+A+MVV+VL+RIAQSGS+VIMSIHQPS RI+GLLDR+I LS G++V++GSP++LP FF  FG PIPE EN TE
Sbjct:   86 ASVKTLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSVVIMSIHQPSARIIGLLDRLIILSHGKSVFNGSPVSLPSFFSSFGRPIPEKENITE 323          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.743e-87
Identity = 170/235 (72.34%), Postives = 200/235 (85.11%), Query Frame = -1
Query:   14 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE-VLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 715
            KTLL+D+SGEA DG+I+AVLGASG+GKSTLIDALA R+A+ SL+G++ LNGE VL+SR+LKVISAYVMQDDLLF MLTV+ETLMFA+EFRLPR+LSKSKK  RV+ALIDQLGLRNAA TVIGD                 IDIIHDPI+LFLDEPTSGLDST+A+MVV+VL+RIAQSGSIVIMSIHQPS RI+ LLDR+I LSRG++V++GSP +LP FF +FG PIPE EN +E
Sbjct:   97 KTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSPASLPGFFSDFGRPIPEKENISE 331          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.059e-84
Identity = 164/237 (69.20%), Postives = 190/237 (80.17%), Query Frame = -1
Query:   14 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 724
            +K KTLLN I+GEA++GEI+A+LGASG+GKSTLIDALA +IA+ SLKGT+ LNGE L+SR+L+VISAYVMQ+DLLF MLTVEETLMFAAEFRLPR+LSKSKK+ RV+ LIDQLGL     TVIGD                  DIIHDPI+LFLDEPTSGLDSTSA+MVV+VL++IA+SGSIVIMSIHQPS RI+  LDR+I LS GQ V+S SP  LP FF EFG PIPE EN  E
Sbjct:   46 AKIKTLLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIARSGSIVIMSIHQPSGRIMEFLDRVIVLSSGQIVFSDSPATLPLFFSEFGSPIPEKENIAE 282          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.659e-43
Identity = 96/236 (40.68%), Postives = 143/236 (60.59%), Query Frame = -1
Query:   14 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKES-LKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 718
            T+ LL  ++G A  G IMA++G SGSGKSTL+D+LA R+A+   + G + LNG+  ++R+   + AYV Q+D+L   LTV ET+ ++A  RLP  +SK +    V+  I +LGL++ +  VIG+                 ++I+  P +LFLDEPTSGLDS SA+ V++ L+ IA+ G  VI S+HQPS  +  L D +  LS G++VY G   +   FF E G P P+  N ++
Sbjct:   42 TRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVVMTGNLLLNGK--KARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGRTVISSVHQPSSEVFALFDDLFLLSSGESVYFGEAKSAVEFFAESGFPCPKKRNPSD 275          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.391e-43
Identity = 97/237 (40.93%), Postives = 145/237 (61.18%), Query Frame = -1
Query:   14 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKES-LKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENENRTE 721
            +T+ +L  ++G A  G + A++G SGSGKST++DALA+R+A  + L GT+ LNG   ++++    +AYV QDD L   LTV ET+ ++A  RLP  + +S+K+  V+  I ++GL++ A TVIG+                 ++I+  P LLFLDEPTSGLDS SA+ V + L+ +++ G  VI SIHQPS  +  L DR+  LS G+TVY G   +   FF + G P P   N ++
Sbjct:   65 ETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFLSGTVLLNGR--KTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSD 299          
The following BLAST results are available for this feature:
BLAST of CV885225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
AB1G_ARATH5.749e-10479.92ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB20G_ARATH2.261e-10078.37ABC transporter G family member 20 OS=Arabidopsis ... [more]
AB16G_ARATH2.499e-9978.99ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB2G_ARATH5.568e-9978.10ABC transporter G family member 2 OS=Arabidopsis t... [more]
AB6G_ARATH9.497e-9976.80ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB18G_ARATH5.223e-8972.27ABC transporter G family member 18 OS=Arabidopsis ... [more]
AB19G_ARATH3.743e-8772.34ABC transporter G family member 19 OS=Arabidopsis ... [more]
AB17G_ARATH5.059e-8469.20ABC transporter G family member 17 OS=Arabidopsis ... [more]
AB15G_ARATH5.659e-4340.68ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB11G_ARATH7.391e-4340.93ABC transporter G family member 11 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885225 ID=CV885225; Name=CV885225; organism=Citrus sinensis; type=EST; length=760bp
CAGTCTAGGGCAACTCGGTCCGGTTCTCGTTCTCGGGTATCGGGTGGCCG
AACTCTTCGAAGAAGTGGGGCAGGTTCATCGGGGAGCCGCTGTAGACGGT
CTGCCCACGGGATAAGAATATCATCCGGTCTAACAACCCGAGAATACGGT
AACTCGGCTGGTGGATCGACATAATTACGATACTGCCACTCTGAGCGATT
CTCTGCAGGACCTTCACGACCATGTAAGCACTCGTGGAGTCCAACCCCGA
GGTTGGCTCGTCGAGGAACAACAAGATTGGGTCGTGAATTATGTCGATTC
CAATCGAGACACGACGTCGTTCGCCGCCCGACACTCCCCTGTGTCCTTCG
TCTCCTATAACTGTCTTTGCCGCGTTCCTTAAGCCGAGCTGATCGATCAG
AGCTTGGACGCGAATCTTCTTCTTCGACTTCGATAGCGTACGTGGCAGCC
GAAACTCGGCAGCGAACATCAGCGTCTCCTCGACGGTGAGCATCGAGAAC
AGAAGGTCGTCTTGCATGACGTAAGCTGATATCACCTTCAGCATCCTCGA
CTCCAACACTTCGCCGTTTAGCTTGATGGTACCTTTCAAGCTCTCTTTCG
CGATACGATTCGCCAGCGCGTCGATTAGAGTCGACTTCCCGGAGCCGCTA
GCCCCAAGCACCGCCATGATTTCTCCGTCGCGCGCCTCGCCGGAGATGTC
GTTCAACAGAGTCTTTGTTTTGGAGAACAAGTTCTCGCCTGGAACGGGAT
CCGTCGCCCT
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