CV885217

Overview
NameCV885217
Unique NameCV885217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_SPIOL (Fructose-1,6-bisphosphatase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.083e-29
Identity = 75/182 (41.21%), Postives = 109/182 (59.89%), Query Frame = -2
Query:   24 SHLQYACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNR----LVELDH------LADKEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 533
            S +  ACK+IA+LV     S+L                 +  K LD+VSNE+  S LRSSG+  I+ASEE+D P+ + +   G ++VV DPLDGS NIDA++ TG+IFG+Y+     +V+ DH       A++++ ++N  Q G  L+AAGY +YSS+ I   + G G +AFTLD   G+FV
Sbjct:  102 SSISLACKQIASLVQRAGISNLT------GIQGAVNIQGEDQKKLDVVSNEVFSSCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECIVDSDHDDESQLSAEEQRCVVNVCQPGDNLLAAGYCMYSSSVIFVLTIGKGVYAFTLDPMYGEFV 277          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_BRANA (Fructose-1,6-bisphosphatase, chloroplastic OS=Brassica napus GN=FBP PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.295e-27
Identity = 74/180 (41.11%), Postives = 107/180 (59.44%), Query Frame = -2
Query:   24 SHLQYACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNR----LVELDHLA----DKEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 533
            S +  ACK+IA+LV     S+L                 +  K LD+VSNE+  + LRSSG+  I+ASEE+D P+ + +   G +VVV DPLDGS NIDA++ TG+IFG+Y+     L + D  +    ++E+ ++N  Q G+ L+AAGY +YSS+ I   + G G  AFTLD   G+FV
Sbjct:  100 SSIAMACKQIASLVQRAGISNLT------GVQGAVNIQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYVVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLPDSDDTSALGSEEERCIVNVCQPGNNLLAAGYCMYSSSVIFVLTLGKGVFAFTLDPMYGEFV 273          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_ARATH (Fructose-1,6-bisphosphatase, chloroplastic OS=Arabidopsis thaliana GN=FBP PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.097e-26
Identity = 71/181 (39.23%), Postives = 107/181 (59.12%), Query Frame = -2
Query:   24 SHLQYACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVEL-----DHLA----DKEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 533
            S +  ACK+IA+LV     S+L                 +  K LD++SNE+  + LRSSG+  I+ASEE+D P+ + +   G +VVV DPLDGS NIDA++ TG+IFG+Y+   E      D ++    ++++ ++N  Q G+ L+AAGY +YSS+ I   + G G  +FTLD   G+FV
Sbjct:  105 SSISLACKQIASLVQRAGISNLT------GVQGAVNIQGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYVVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECIVDDSDDISALGSEEQRCIVNVCQPGNNLLAAGYCMYSSSVIFVLTLGKGVFSFTLDPMYGEFV 279          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_WHEAT (Fructose-1,6-bisphosphatase, chloroplastic OS=Triticum aestivum GN=FBP PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.871e-26
Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = -2
Query:   24 SHLQYACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVELDHLADK-------EKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 533
            S +  ACK+IA+LV     S+L                 +  K LD++SNE+  + LR SG+  ++ASEE+D P+ + +   G ++VV DPLDGS NIDA++ TG+IFG+Y+   E  H+ D        +  ++N  Q GS L+AAGY +YSS+ I   + G+G + FTLD   G+FV
Sbjct:   98 SSISTACKQIASLVQRAPISNLT------GVQGATNVQGEDQKKLDVISNEVFSNCLRWSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPSDEC-HIGDDATLDEVTQMCIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYVFTLDPMYGEFV 269          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_ORYSJ (Fructose-1,6-bisphosphatase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0267300 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.443e-26
Identity = 70/175 (40.00%), Postives = 106/175 (60.57%), Query Frame = -2
Query:   24 ACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVE-LDHLAD-------KEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 518
            ACK+IA+LV     S+L                 +  K LD+VSNE+  + L+SSG+  ++ASEE+D P+ + +   G ++VV DPLDGS NIDA++ TG+IFG+Y+   E L  +AD       +++ +++  Q GS L+AAGY +YSS+ I   + G+G + FTLD   G+FV
Sbjct:  100 ACKQIASLVQRAPISNLT------GVQGAVNVQGEDQKKLDVVSNEVFSNCLKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYVFTLDPMYGEFV 268          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_SOYBN (Fructose-1,6-bisphosphatase, chloroplastic OS=Glycine max GN=FBP PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = -2
Query:   24 SHLQYACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVELDHLAD----------KEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 533
            S +  ACK+IA+LV     S+L                 +  K LD+VSNE+  + LRSSG+  I+ASEE+D P+ + +   G ++VV DPLDGS NIDA+  TG+ F +Y+   E   LAD          +++ ++N  Q GS L+AAGY +YSS+ I   + G+G   FTLD   G+FV
Sbjct:   94 SSISMACKQIASLVQRANISNLT------GVQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAASTGSNFWIYSPNDEC--LADIDDDPTLDTTEQRCIVNVCQPGSNLLAAGYCMYSSSIIFVLTLGNGVFVFTLDPMYGEFV 267          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_PEA (Fructose-1,6-bisphosphatase, chloroplastic OS=Pisum sativum GN=FBP PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.341e-24
Identity = 69/183 (37.70%), Postives = 102/183 (55.74%), Query Frame = -2
Query:   24 SHLQYACKRIAALVASPFNSSLAKHMXXXXXXXXXXXGRDVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVE-LDHLAD----------KEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 533
            S +  ACK+IA+LV     S+L                 +  K LD++SNE+  + LRSSG+  I+ASEE+D  + + +   G ++VV DPLDGS N+DA++ TG+IFG+Y+   E L    D          +++ ++N  Q GS L+AAGY +YSS+     + G G   FTLD   G+FV
Sbjct:   93 SSISMACKQIASLVQRANISNLTGTQGAVNIQG------EDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVAVAVEESYSGNYIVVFDPLDGSSNLDAAVSTGSIFGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVAFVLTIGKGVFVFTLDPLYGEFV 269          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P2_ARATH (Fructose-1,6-bisphosphatase, cytosolic OS=Arabidopsis thaliana GN=At1g43670 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = -2
Query:   24 KPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVELDHLADKEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 407
            K LD++SN++ +++L SSG+ +++ SEED+   ++     G + VV DPLDGS NID  +  GTIFG+Y     LDH  +   A  + L+ G+ +VAAGY +Y S+ +L  S G+G H FTLD S G+F+
Sbjct:   74 KKLDVLSNDVFVNALVSSGRTSVLVSEEDEEATFVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYT----LDHTDEPTTA--DVLKPGNEMVAAGYCMYGSSCMLVLSTGTGVHGFTLDPSLGEFI 197          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P2_BRANA (Fructose-1,6-bisphosphatase, cytosolic OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23
Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 KPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVELDHLADKEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 407
            K LD++SN++ + +L SSG+ +++ SEED+   ++     G + VV DPLDGS NID  +  GTIFG+Y     ++H    E    + L+ G+ +VAAGY +Y S+ +L  S G+G H FTLD S G+F+
Sbjct:   73 KKLDVLSNDVFVKALVSSGRTSVLVSEEDEEATFVESSKCGKYCVVFDPLDGSSNIDCGVSIGTIFGIYT----MEH--SDEPTTKDVLKPGNEMVAAGYCMYGSSCMLVLSTGTGVHGFTLDPSLGEFI 196          
BLAST of CV885217 vs. ExPASy Swiss-Prot
Match: F16P1_RABIT (Fructose-1,6-bisphosphatase 1 OS=Oryctolagus cuniculus GN=FBP1 PE=1 SV=4)

HSP 1 Score: 106.686 bits (265), Expect = 9.607e-23
Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = -2
Query:   24 DVAKPLDIVSNEIILSSLRSSGKVAIMASEEDDSPIWINDD--GPFVVVTDPLDGSRNIDASIPTGTIFGVYNRLVELDHLADKEKALLNSLQSGSRLVAAGYVLYSSATILCASFGSGTHAFTLDHSTGDFV 416
            D  K LD++SN+++++ L+SS    ++ SEED + I +  +  G +VV  DPLDGS NID  +  GTIFG+Y +       +  E +  ++LQ G  LVAAGY LY SAT+L  + GSG ++F LD + G+F+
Sbjct:   69 DQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKK------STDEPSTKDALQPGRNLVAAGYALYGSATMLVLAGGSGVNSFMLDPAIGEFI 195          
The following BLAST results are available for this feature:
BLAST of CV885217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 357
Match NameE-valueIdentityDescription
F16P1_SPIOL3.083e-2941.21Fructose-1,6-bisphosphatase, chloroplastic OS=Spin... [more]
F16P1_BRANA1.295e-2741.11Fructose-1,6-bisphosphatase, chloroplastic OS=Bras... [more]
F16P1_ARATH1.097e-2639.23Fructose-1,6-bisphosphatase, chloroplastic OS=Arab... [more]
F16P1_WHEAT1.871e-2639.11Fructose-1,6-bisphosphatase, chloroplastic OS=Trit... [more]
F16P1_ORYSJ2.443e-2640.00Fructose-1,6-bisphosphatase, chloroplastic OS=Oryz... [more]
F16P1_SOYBN7.859e-2539.56Fructose-1,6-bisphosphatase, chloroplastic OS=Glyc... [more]
F16P1_PEA1.341e-2437.70Fructose-1,6-bisphosphatase, chloroplastic OS=Pisu... [more]
F16P2_ARATH1.482e-2343.08Fructose-1,6-bisphosphatase, cytosolic OS=Arabidop... [more]
F16P2_BRANA7.356e-2341.54Fructose-1,6-bisphosphatase, cytosolic OS=Brassica... [more]
F16P1_RABIT9.607e-2342.11Fructose-1,6-bisphosphatase 1 OS=Oryctolagus cunic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013D03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885217 ID=CV885217; Name=CV885217; organism=Citrus sinensis; type=EST; length=609bp
GATCTTTATGTTTGGATGTGTGACACAAAGTCTCCTGTTGAATGGTCTAA
TGTAAATGCATGTGTTCCTGACCCAAAGCTAGCACAGAGTATCGTGGCTG
ATGAATAGAGGACATATCCAGCAGCTACCAGCCGACTTCCACTCTGCAGA
GAGTTCAGGAGTGCCTTCTCTTTGTCAGCTAAATGATCTAGCTCCACAAG
GCGATTATAGACCCCAAATATGGTTCCAGTGGGTATGGAAGCATCTATAT
TACGAGAACCATCAAGAGGATCTGTAACAACCACAAATGGGCCATCATCA
TTTATCCAAATTGGCGAATCATCTTCTTCCGAAGCCATGATCGCAACTTT
TCCAGAACTCCGAAGAGAGGACAATATGATTTCATTGGAGACTATATCAA
GCGGCTTAGCAACATCCCTGCCGGACTCAGCAGACCCACCAGCAGCTGAA
CCACCCATATGCTTAGCAAGGCTGGAGTTGAAAGGCGAAGCCACAAGAGC
TGCAATTCTCTTGCAAGCATACTGAAGATGGGAAAGCAGGACCACCAAAT
CATCCCCCACATTGAGCCCTCCCTTGCCTACATAATCCATCAACGTGGGA
AAGCCATTT
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