CV885215

Overview
NameCV885215
Unique NameCV885215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.468e-64
Identity = 117/150 (78.00%), Postives = 131/150 (87.33%), Query Frame = -3
Query:  335 PKSMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGK----KDGKLSPYYHEDASDQGSVA 772
            PKSMSVIAGSCGYIAPEYAYTL VNEKSDIYSFGVVILE+VT + PVDPE GEKDLVKWVCSTLDQKG++HV+DPKLD CFKEEI K+LN+GL CTSPLPINRP+MRRVVK+LQE+G  +     K    KDGKL+PYY+ED SDQGS+A
Sbjct:  847 PKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEKDLVKWVCSTLDQKGIEHVIDPKLDSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEIGGGDEDSLHKIRDDKDGKLTPYYNEDTSDQGSIA 996          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.413e-49
Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = -3
Query:  359 PKSMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEV------GAENRSKTGKKDGKLSPYYHED 772
            P++MS IAGSCGYIAPEY YTL VNEKSDIYSFGVV+LELVTG+ P D E G+KD+ KWVC+ LD+ G++ V+DPKLD  FKEEI KV++IGL CTSPLP+NRP+MR+VV +LQEV       + N SK  K  GKLSPYY ED
Sbjct:  852 PEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVCTALDKCGLEPVIDPKLDLKFKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSSPNTSKRSKTGGKLSPYYTED 995          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.395e-26
Identity = 64/126 (50.79%), Postives = 88/126 (69.84%), Query Frame = -3
Query:  407 KSMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCSTLDQK-GVDHVLDPKLD---CCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRS 769
            +SMSV+AGS GYIAPEYAYTL V++KSDIYS+GV++LE++TG+  V+PEFGE   +V WV S L  K  V+ VLD  +       +EE+ ++L I L CTS  P +RP MR V+ +LQE   + ++
Sbjct:  881 ESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKPKRKT 1006          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.091e-25
Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = -3
Query:  428 SMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVC-------------------STLDQKGVDHVLDPKLDCCFK--EEICKVLNIGLFCTSPLPINRPAMRRVVKLLQE 766
            SMS +AGS GYIAPEY YT  VNEKSD+YSFGVV+LEL+TG+ P D  FGE KD+VK+                     S  + + +  ++DPK+    +  EEI KVL++ L CTS  PINRP MR+VV+LL+E
Sbjct:  854 SMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLKE 988          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 60/144 (41.67%), Postives = 90/144 (62.50%), Query Frame = -3
Query:  347 SMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCST---LDQKGVDHVLDPKLDCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKLSPYYHEDASDQ 766
            S  ++ G+ GYIAPEYAYT  VNEKSD+YSFGVV++ELVTG+ P++ +FGE  D+V WV S     +++ +  ++D  ++  +KE+  KVL I L CT   P  RP M+ VV +L+++       +G+        Y E A+D+
Sbjct:  849 SAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALKVLTIALLCTDKSPQARPFMKSVVSMLEKIEPSYNKNSGEAS------YGESANDE 986          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.780e-21
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = -3
Query:  425 SMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCSTLDQ-KGVDHVLDPKLDCC---FKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEV 766
            +MS +AGS GYIAPEY YT+ + EKSD+YS+GVV+LE+++GR  V+P+ G+   +V+WV   +   +    VLD KL        +E+ + L I +FC +P P+ RP M+ VV LL EV
Sbjct:  934 AMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEV 1052          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.742e-21
Identity = 58/121 (47.93%), Postives = 71/121 (58.68%), Query Frame = -3
Query:  422 KSMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL-DQKGVDHVLDPKL----DCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVG 769
            KS+S +AGS GYIAPEYAYT+ V EK DIYSFGVV+LEL+TG+ PV P     DL  W  + + D      +LDP L    D      +  V  I + CT   P +RP MR VV +L E G
Sbjct:  983 KSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLIESG 1103          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.194e-21
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = -3
Query:  386 KSMSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDG 769
            +S + IAGS GYIAPEY Y++ + EKSD+YS+GVV+LE++TG+ P+DP   +   +V WV    D + +D  L  + +    EE+ + L + L C +P+P +RP M+ V  +L E+  + R ++ K DG
Sbjct:  952 RSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKKIRDIQVIDQGLQARPE-SEVEEMMQTLGVALLCINPIPEDRPTMKDVAAMLSEI-CQEREESMKVDG 1078          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19
Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  392 AGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFG-EKDLVKWVCSTLDQKGV--DHVLDPKLD--CCFKEE-ICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKK 751
            A S GYIAPEYAY+L   EKSD+YS G+V++E+VTG++P D  FG E D+V+WV + L+  G   D ++DPKL     F+E+  C+VL I L CT   P  RP+ R+    L  V   NR+   KK
Sbjct: 1124 ACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSRQACDSLLHV-YNNRTAGYKK 1248          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 58/118 (49.15%), Postives = 72/118 (61.02%), Query Frame = -3
Query:  434 MSVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCST-------LDQKGVDHVLDPKLDCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLL 763
            MS IAGS GYIAPEYAYTL V+EKSD+YSFGVV+LEL+ G+ PV  EFGE  D+V+WV +T        D   V  ++DP+L       +  V  I + C       RP MR VV +L
Sbjct:  851 MSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVG-EFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
The following BLAST results are available for this feature:
BLAST of CV885215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
HSL1_ARATH3.468e-6478.00Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RLK5_ARATH2.413e-4966.67Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y5148_ARATH6.395e-2650.79Probable leucine-rich repeat receptor-like protein... [more]
HSL2_ARATH1.091e-2549.63LRR receptor-like serine/threonine-protein kinase ... [more]
IKU2_ARATH4.583e-2441.67Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y1341_ARATH2.780e-2145.38Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH4.742e-2147.93Probable leucine-rich repeat receptor-like protein... [more]
RCH1_ARATH6.194e-2140.31LRR receptor-like serine/threonine-protein kinase ... [more]
GSO1_ARATH1.526e-1946.83LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH1.992e-1949.15Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013D02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885215 ID=CV885215; Name=CV885215; organism=Citrus sinensis; type=EST; length=774bp
ACACCTGAGCGATGCCAATTGCCAGGGCTTTAAAGCATCACTAAACAGTG
TATTCATAACTTTGAAGTTTGAAATAGCTACTAGCTTTGTTTTGTAGTAA
ATACCCATCAAGATACTCAATTAATTACATATAAAACTACTTAATAACTC
CCATTCTTCTTTTCTTTCATCCTCTTGGCCCCTCAATCTGGAAAATTTTC
CCTTCTTTTATCCCATTCCCACCCACCCTGTAAAGCAAGCACCGAGTGGG
TGTAATAATTGGAATGTGAGCTTATGGTACTCCTTAAACAAACCATCCTG
CTTTTCAAACAAAACCTTTGAGCAAAAGTTCTCAAGCTACACTTCCCTGA
TCAGAAGCATCTTCATGGTAATAAGGTGACAACTTCCCGTCTTTTTTACC
GGTCTTGGAACGGTTCTCCGCGCCCACTTCTTGCAACAACTTCACCACCC
TTCTCATTGCAGGGCGGTTGATGGGGAGAGGGCTAGTGCAAAATAGGCCA
ATGTTGAGGACCTTGCATATTTCTTCCTTAAAACAGCAATCGAGTTTGGG
ATCAAGAACATGGTCCACTCCTTTCTGATCCAAAGTAGAGCAGACCCATT
TGACCAAATCCTTCTCCCCAAACTCCGGATCGACTGGCAGTCTTCCAGTT
ACTAACTCAAGAATGACTACTCCGAAACTGTATATGTCGCTCTTCTCGTT
CACACCAAGTGTGTAGGCATATTCTGGGGCGATGTAACCACAGGAACCAG
CAATGACAGACATTGATTTAGGCT
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