CV885174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.779e-26 Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 71 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKA 129
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.779e-26 Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 71 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 129
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 73 VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 131
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 73 VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 131
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 76 VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 134
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 76 VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 134
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSJ (Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 74 VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 132
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+ Sbjct: 74 VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 132
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINP+LLPKK+ Sbjct: 70 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKN 128
BLAST of CV885174 vs. ExPASy Swiss-Prot
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.263e-25 Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 192 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 368 VLELAGNAARDNKKNRIIPRH+LLAVRNDEELGKLLAGVTIAHGGVLPNINP+LLPKK+ Sbjct: 72 VLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKT 130 The following BLAST results are available for this feature:
BLAST of CV885174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885174 ID=CV885174; Name=CV885174; organism=Citrus sinensis; type=EST; length=640bpback to top |