CV885158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: DDPS6_ARATH (Dehydrodolichyl diphosphate synthase 6 OS=Arabidopsis thaliana GN=At2g17570 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 6.021e-67 Identity = 125/237 (52.74%), Postives = 174/237 (73.42%), Query Frame = -1 Query: 227 EGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHHAYLEXXXKQL 937 +G+GH+AGF LMS+L+YC EL +KYV+IYAFSIDNF+R E+ ++ + +YG+RV FIGNL L+++ +R AAEKVM+AT+KN+R+V+LIC+AY+ST+EIV V+++C + K +A ++ +D + + +N+EK I+LVD+E++M M V P+PDILIR+SGE RLSNFLLWQ+ N L +P ALWPEIGLRHL+WAILNFQR+H+YLE KQL Sbjct: 61 DGSGHKAGFSALMSMLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSC-INKSDNIEASNYKHEDSDSDIEGTDMENQEKK-IQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAILNFQRNHSYLEKRKKQL 295
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: DDPS8_ARATH (Dehydrodolichyl diphosphate synthase 8 OS=Arabidopsis thaliana GN=At5g60510 PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 7.163e-44 Identity = 89/232 (38.36%), Postives = 136/232 (58.62%), Query Frame = -1 Query: 245 GEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHHAYLE 940 G AGHRAGF+++ +L+YC E+ V YV++YAF +DNFKR E++ + + GVR+ F G+L ++E R A +K+M T +N +++++C+AYS++ EIVH V ++C+ KT + ++L D+E+ MY V P PD+++RT G +RLSNF+ WQ+S +L+ EALWPE+GL HL+WAIL FQR YL+ Sbjct: 57 GLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKT----------------------GDGSSALELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQRMQDYLQ 266
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: DDPS7_ARATH (Dehydrodolichyl diphosphate synthase 7 OS=Arabidopsis thaliana GN=At5g60500 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.327e-41 Identity = 89/231 (38.53%), Postives = 135/231 (58.44%), Query Frame = -1 Query: 248 GEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHHAYL 940 G AGHRAGF+++ +L+YC E+ V YV+++AF +DNFKR E++ + + GVR+ F G+L ++E R A +K+M T +N +++++C+AYS++ EIVH V ++C V K T + ++L D+E+ MY + P PD++IRT G +RLSNF+ WQ+S +L+ EALWPE+GL HL+WAIL FQR YL Sbjct: 56 GLDAGHRAGFISVKYILQYCKEIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSC-VRKCT---------------------NGDDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLWHLVWAILKFQRMQDYL 264
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_THETN (Undecaprenyl pyrophosphate synthetase OS=Thermoanaerobacter tengcongensis GN=uppS PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.823e-32 Identity = 81/221 (36.65%), Postives = 118/221 (53.39%), Query Frame = -1 Query: 266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928 GH+AG + +++ C EL +KY+++YAFS +N+KR + E+ + E L+K V V FIG++ + E ++ EK + T KNT +V+ I L Y +EIV + C KK + P D+TED + +H+Y PDPD++IRTSGE RLSNFLLWQS+ L+ E LWP+ RHLI A+L +Q Sbjct: 43 GHKAGVNAVREVIRSCRELGIKYLTLYAFSTENWKRPKEEVDFLMDLLVEYLSKEVDE---LNKNNVVVKFIGDISRLPEKCQIEIEKAQKLTEKNTGLVVNIALNYGGRDEIVKATQNIC---KKVLNRELSPE----DITEDT---------------ITQHLYTASQPDPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFKKRHLIEALLYYQ 238
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: RER2_YEAST (Dehydrodolichyl diphosphate synthetase OS=Saccharomyces cerevisiae GN=RER2 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.196e-28 Identity = 71/229 (31.00%), Postives = 110/229 (48.03%), Query Frame = -1 Query: 248 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSN--CMLYAPEALWPEIGLRHLIWAILNFQRHHAYL 928 GH AGF+++ +L+ C E V +++AFSI+NFKR+ E+ KYGVR+ IG+L L+ + + + T N R + IC Y+ EEI+H ++ET + ++K+ I LE H+Y P D+LIRTSG +RLS+FL+WQ+S+ + + LWPE G + W +L F H ++L Sbjct: 56 GHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILHAMKETIV--------------------------QHKKGAAIDESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLKFSFHKSFL 258
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: DHDDS_MOUSE (Dehydrodolichyl diphosphate synthase OS=Mus musculus GN=Dhdds PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.039e-26 Identity = 78/228 (34.21%), Postives = 116/228 (50.88%), Query Frame = -1 Query: 245 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHHAYLE 928 GH GF L L++C+ L + V++YAFSI+NFKR+++E+ E L K+GV + +G+L L+ ++ ++AT + + +C AY+S EI + V E + + +P +DV+E L+K +Y P PDILIRTSGE RLS+FLLWQ+S+ L LWPE +L AIL FQR+H L+ Sbjct: 50 GHTQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANAVRE---MAWGVEQGLLEP----SDVSESL---------------LDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQRNHGALQ 255
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: DHDDS_HUMAN (Dehydrodolichyl diphosphate synthase OS=Homo sapiens GN=DHDDS PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 6.735e-26 Identity = 76/228 (33.33%), Postives = 116/228 (50.88%), Query Frame = -1 Query: 245 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHHAYLE 928 GH GF L L++C+ L + V++YAFSI+NFKR+++E+ E L K+GV + +G+L L+ ++ + ++AT + + +C AY+S EI + V E + + P +D++E L+K +Y P PDILIRTSGE RLS+FLLWQ+S+ L LWPE +L AIL FQ +H+ L+ Sbjct: 50 GHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVRE---MAWGVEQGLLDP----SDISESL---------------LDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQ 255
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_HELMO (Undecaprenyl pyrophosphate synthetase OS=Heliobacillus mobilis GN=uppS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.233e-24 Identity = 69/222 (31.08%), Postives = 109/222 (49.10%), Query Frame = -1 Query: 266 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 931 AGHRAG +L +L+ C + ++ Y+++YAFS +N+KR +E+ L GVR+ IG + + R EK + T+ NTR+V+ + L Y EIV V+ + + V D + K + +++Y PDPD+LIR SGE RLSNFLLWQS+ ++ LWP+ G + ++ AI+++Q Sbjct: 53 AGHRAGVESLRRVLEVCEDYNIAYLTVYAFSTENWKRPADEVNALFDLLVEYLHRELNT---LHSKGVRIRAIGKIEDLPGGPRRELEKAIAKTANNTRLVLNVALNYGGRFEIVEAVKSIARLAA------------EGKVNPDQIDEKY----------MSQYLYTADVPDPDLLIRPSGELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMVQAIVDYQ 249
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_THET2 (Undecaprenyl pyrophosphate synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=uppS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 9.103e-23 Identity = 69/221 (31.22%), Postives = 105/221 (47.51%), Query Frame = -1 Query: 266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928 GH G +L++C+E+ +K V+++ FS DNFKR E+ ED + ++ VRV FIG S + A E++ R T + + + I L Y EEIV V+ L + + + P+ +T + D+ +H+Y PDPD +IRTSGE RLS FLLWQS+ Y + LWPE + A+ ++Q Sbjct: 54 GHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTDNFKRPPEEVE-TLMNLFLREAERMAEDHRILEHQVRVRFIGRREGFSPEVVRAIERLERRTEGHRGMFLNIALGYGGREEIVDAVKRLLL---EAEARGLSPKEVAEGLTPE---------------DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQ 255
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_THET8 (Undecaprenyl pyrophosphate synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=uppS PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.553e-22 Identity = 68/221 (30.77%), Postives = 105/221 (47.51%), Query Frame = -1 Query: 266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928 GH G +L++C+E+ +K V+++ FS DNFKR E+ ED + ++ VRV FIG S + A E++ R T + + + I + Y EEIV V+ L + + + P+ +T + D+ +H+Y PDPD +IRTSGE RLS FLLWQS+ Y + LWPE + A+ ++Q Sbjct: 54 GHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTDNFKRPPEEVE-TLMNLFLREAERMAEDHRILEHQVRVRFIGRREGFSPEVVRAIERLERRTEGHRGMFLNIAMGYGGREEIVDAVKRLLL---EAEARGLSPKEVAEGLTPE---------------DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQ 255 The following BLAST results are available for this feature:
BLAST of CV885158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885158 ID=CV885158; Name=CV885158; organism=Citrus sinensis; type=EST; length=943bpback to top |