CV885144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885144 vs. ExPASy Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.354e-57 Identity = 110/127 (86.61%), Postives = 118/127 (92.91%), Query Frame = 1 Query: 4 ASFRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKR 384 A +RR+PKLRGIAGGM +GLPKY+PVN+KDIE AGF EGDEVSLETLK+KGLINPSGRERKLPLKILG GELS KL FKARAFST AKEKLEA+GCTLTVLPGRKKWVKPSVAKN ARA+EYFAKKR Sbjct: 136 ALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKR 262
BLAST of CV885144 vs. ExPASy Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54 Identity = 107/125 (85.60%), Postives = 113/125 (90.40%), Query Frame = 1 Query: 10 FRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKR 384 +RR+PKLRGIAGGMHAGLPKYV VNL DIE AGF +G+EVSLETLK K +INPSGRERKLPLKIL DGELSKKL KA AFSTSAKEKLE AGC+L VLPGRKKWVKPSVAKNLARAEEYFAKKR Sbjct: 123 YRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKR 247
BLAST of CV885144 vs. ExPASy Swiss-Prot
Match: RL15_RUBXD (50S ribosomal protein L15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplO PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11 Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 13 RRIPKLRGIAGGMHAGL-PK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 306 RR+P+L+G A G H PK Y PVN+ ++ A +EGD + L+ L+ GLI ++ +KILGDGE+ + + +A AFS +A+EK+EAAG VL Sbjct: 59 RRLPRLKGEARGRHTPAHPKVYDPVNVGELAA---VEGDTIGLDELRAAGLIR---KKADTLVKILGDGEIDRPVTVRAHAFSRAAREKIEAAGGRAEVL 152
BLAST of CV885144 vs. ExPASy Swiss-Prot
Match: RL15_CORDI (50S ribosomal protein L15 OS=Corynebacterium diphtheriae GN=rplO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 16 RIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 300 R+PKL+G Y VN+ D+E A F +G E+++ + KGL+ P K P+K+LG+GE+S KLN A FS SA EK+EAAG ++T Sbjct: 61 RLPKLKGFKNPAKV---YYQVVNVSDLEKA-FPQGGEIAVADIVAKGLVRP-----KQPVKVLGNGEISVKLNVTATKFSKSAVEKIEAAGGSVT 146 The following BLAST results are available for this feature:
BLAST of CV885144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885144 ID=CV885144; Name=CV885144; organism=Citrus sinensis; type=EST; length=647bpback to top |