CV885143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.347e-60 Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = -1 Query: 261 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKR 656 EGGQ LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGF EGDEVSLETLK+KGLINPSGRERKLPLKILG GELS KL FKARAFST AKEKLEA+GCTLTVLPGRKKWVKPSVAKN ARA+EYFAKKR Sbjct: 131 EGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKR 262
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.332e-59 Identity = 115/132 (87.12%), Postives = 120/132 (90.91%), Query Frame = -1 Query: 261 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKR 656 EGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGF +G+EVSLETLK K +INPSGRERKLPLKIL DGELSKKL KA AFSTSAKEKLE AGC+L VLPGRKKWVKPSVAKNLARAEEYFAKKR Sbjct: 116 EGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKR 247
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_RUBXD (50S ribosomal protein L15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplO PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGL-PK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPL RR+P+L+G A G H PK Y PVN+ ++ A +EGD + L+ L+ GLI ++ +KILGDGE+ + + +A AFS +A+EK+EAAG VL Sbjct: 51 EGGQMPLQRRLPRLKGEARGRHTPAHPKVYDPVNVGELAA---VEGDTIGLDELRAAGLIR---KKADTLVKILGDGEIDRPVTVRAHAFSRAAREKIEAAGGRAEVL 152
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_CORDI (50S ribosomal protein L15 OS=Corynebacterium diphtheriae GN=rplO PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = -1 Query: 345 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 656 EGGQMPL+ R+PKL+G Y VN+ D+E A F +G E+++ + KGL+ P K P+K+LG+GE+S KLN A FS SA EK+EAAG ++T Sbjct: 52 EGGQMPLHMRLPKLKGFKNPAKV---YYQVVNVSDLEKA-FPQGGEIAVADIVAKGLVRP-----KQPVKVLGNGEISVKLNVTATKFSKSAVEKIEAAGGSVT 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_CORJK (50S ribosomal protein L15 OS=Corynebacterium jeikeium (strain K411) GN=rplO PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = -1 Query: 345 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 656 EGGQMPL+ R+PKL+G Y VN+ D+E A F G +V++ + GL + P+K+LG+GE+S KLN A FS SAK+K+EAAG T+T Sbjct: 52 EGGQMPLHMRLPKLKGFKNPAKV---TYQVVNVSDLEKA-FSNGGDVTVADIVAAGLAR-----KNQPVKVLGNGEISVKLNVTANKFSGSAKQKIEAAGGTVT 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_AQUAE (50S ribosomal protein L15 OS=Aquifex aeolicus GN=rplO PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 49/100 (49.00%), Postives = 60/100 (60.00%), Query Frame = -1 Query: 357 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 656 EGGQ PLY RIPK G + +Y PVN+ I+ F +G E++ E L KGL + R +KILGDGEL+KK KA AFS SAKEK+E AG Sbjct: 53 EGGQTPLYMRIPK----RGFKNPTRKEYTPVNVGVIDKL-FEDGMEITPEVLASKGLCDEKDR-----VKILGDGELTKKFVIKAHAFSKSAKEKIEKAG 142
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_CORA7 (50S ribosomal protein L15 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=rplO PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.613e-13 Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = -1 Query: 345 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 656 EGGQMP++ R+PKL+G H +Y VN+ D+ A F G +V++ + GL+ + P+K+LG+GE++ KLN A FS SA EK+EAAG T T Sbjct: 52 EGGQMPIHMRLPKLKGFKNPNHV---EYQVVNVADL-AEAFANGGDVTVADIVAAGLVR-----KNQPVKVLGNGEINVKLNVTADKFSKSAVEKIEAAGGTAT 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_THEFY (50S ribosomal protein L15 OS=Thermobifida fusca (strain YX) GN=rplO PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = -1 Query: 345 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 656 EGGQMPL RRIPKL+G + + Y VNL + + EG EV++E L KG + + P+K+LG GE+S + A AFS+SAKEK+ AAG ++T Sbjct: 52 EGGQMPLIRRIPKLKGFSNAKFKTV--YQVVNLDKLSKL-YPEGGEVTIEDLVAKGAVR-----KNQPVKVLGTGEISVPVRVSANAFSSSAKEKILAAGGSVT 147
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplO PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + PLKILGDGELS L+ A AF+ +A++K+EAAG ++ ++ Sbjct: 51 EGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVTQNDG----PLKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + PLKILGDGELS L+ A AF+ +A++K+EAAG ++ ++ Sbjct: 51 EGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVTQNDG----PLKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147 The following BLAST results are available for this feature:
BLAST of CV885143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885143 ID=CV885143; Name=CV885143; organism=Citrus sinensis; type=EST; length=656bpback to top |