CV885083

Overview
NameCV885083
Unique NameCV885083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.971e-107
Identity = 189/233 (81.12%), Postives = 209/233 (89.70%), Query Frame = -3
Query:  218 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 916
            DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSAN+D+AK +V+DAK DYPAACNAMETLLVHKDL  NG L+EL+VELQ +GV + GGPRAS LL IPE R  HHEY+S+ CT+EIVDDV AAIDHIH+HGSAHTD I+ ED +VAE FL QVDS++V HNASTRF DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI RG+G VVDGD+G+VYTHK+L
Sbjct:  481 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANMDMAKKVVLDAKTDYPAACNAMETLLVHKDLVQNGCLDELIVELQIKGVVIHGGPRASSLLHIPEARSLHHEYSSLACTIEIVDDVYAAIDHIHRHGSAHTDSIITEDHEVAEIFLRQVDSSSVLHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIARGSGQVVDGDKGIVYTHKDL 713          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 2.574e-107
Identity = 187/236 (79.24%), Postives = 210/236 (88.98%), Query Frame = -3
Query:  209 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 916
            DDVIDLVIPRGSNKLVSQIK STKIPVLGHADGICHVYVDKSA++D+AK I +DAKIDYPAACNAMETLLVHKDLA NG LN+L+VELQ +GV L+GGP+AS LL IPE R F HEY+S+ CTVE+V+DV AAIDHIHQHGSAHTD I+ EDQ+VAE FL QVDSAAVFHNASTRF DG RFGLGAEVGIST RIHARGPVGVEGLLTT+W+ RG+G +VDGD+ +VY+HK+L  Q
Sbjct:  481 DDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRITVDAKIDYPAACNAMETLLVHKDLAQNGGLNDLIVELQTKGVSLYGGPKASSLLMIPEARTFRHEYSSLACTVEVVEDVYAAIDHIHQHGSAHTDSIITEDQEVAEVFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLARGSGQIVDGDKSIVYSHKDLTQQ 716          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 2.179e-106
Identity = 190/233 (81.55%), Postives = 204/233 (87.55%), Query Frame = -3
Query:  218 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 916
            DDVIDLVIPRGSNKLVSQIK STKIPVLGHADGICHVYVDKS  LD+AK IV DAK+DYPAACNAMETLLVHKDL  NG L++L+  LQ +GV L+GGPRAS  L IPET+ FHHEY+S  CTVEIV+DV  AIDHIHQHGSAHTDCIV ED +VAE FL QVDSAAVFHNASTRF DG RFGLGAEVGISTSRIHARGPVGVEGLLTTRWI+RG G VVDGD G+VYTHK+L
Sbjct:  481 DDVIDLVIPRGSNKLVSQIKNSTKIPVLGHADGICHVYVDKSGKLDMAKRIVSDAKLDYPAACNAMETLLVHKDLEQNGFLDDLIYVLQTKGVTLYGGPRASAKLNIPETKSFHHEYSSKACTVEIVEDVYGAIDHIHQHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWIMRGKGQVVDGDNGIVYTHKDL 713          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 3.479e-104
Identity = 188/237 (79.32%), Postives = 208/237 (87.76%), Query Frame = -3
Query:  212 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLAL 916
            DDVIDLVIPRGSNKLVSQIKEST+IPVLGHADGICHVYVDKSAN+D+AK IV+DAK DYPAACNAMETLLVHKDLA NG LN+L+V+L+ EGV +FGGPR   L    I  T+ F+ EY+S  CTVEIVDDV AAI+HI+ HGSAHTDCI+AED KVAETFL  VDSAAV HNASTRFCDG RFGLGAEVGISTSRIHARGPVGVEGLLTTRW+L+G+G VV GD+GVVYTHK+L L
Sbjct:  478 DDVIDLVIPRGSNKLVSQIKESTRIPVLGHADGICHVYVDKSANMDMAKRIVLDAKTDYPAACNAMETLLVHKDLAENGGLNDLIVDLRTEGVTMFGGPRIDALQEFNIQATQTFNREYSSPACTVEIVDDVYAAIEHINHHGSAHTDCIIAEDHKVAETFLQLVDSAAVLHNASTRFCDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWVLKGSGQVVHGDKGVVYTHKDLPL 714          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 1.012e-103
Identity = 181/237 (76.37%), Postives = 204/237 (86.08%), Query Frame = -3
Query:  206 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQS 916
            DDVIDLVIPRGSNKLV+QIK +TKIPVLGHADGICHVYVDK+ + D+AK IV DAK+DYPAACNAMETLLVHKDL  N  LNEL+  LQ  GV L+GGPRASK+L IPE R F+HEY +  CTVE+V+DV  AIDHIH+HGSAHTDCIV ED +VAE FL QVDSAAVFHNASTRF DG RFGLGAEVG+ST RIHARGPVGVEGLLTTRWI+RG G VVDGD G+VYTH+++ +Q+
Sbjct:  481 DDVIDLVIPRGSNKLVTQIKNTTKIPVLGHADGICHVYVDKACDTDMAKRIVSDAKLDYPAACNAMETLLVHKDLEQNAVLNELIFALQSNGVTLYGGPRASKILNIPEARSFNHEYCAKACTVEVVEDVYGAIDHIHRHGSAHTDCIVTEDHEVAELFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGVSTGRIHARGPVGVEGLLTTRWIMRGKGQVVDGDNGIVYTHQDIPIQA 717          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 375.555 bits (963), Expect = 2.255e-103
Identity = 184/236 (77.97%), Postives = 208/236 (88.14%), Query Frame = -3
Query:  209 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 916
            DDVIDLVIPRGSNKLVSQIK STKIPVLGHADGICHVY+DKSA++D+AK+IV+DAKIDYPAACNAMETLLVHKDL  +  L++++V L+ EGV ++GGP A K L  P+   FHHEY+SM CTVE VDDV++AIDHIH++GSAHTDCIV  D KVAETFL +VDSAAVFHNASTRF DGARFGLGAEVGIST RIHARGPVGVEGLLTTRWILRG G VV+GD+ VVYTHK+L LQ
Sbjct:  481 DDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYIDKSADMDMAKHIVMDAKIDYPAACNAMETLLVHKDLMKSPGLDDILVALKTEGVNIYGGPIAHKALGFPKAVSFHHEYSSMACTVEFVDDVQSAIDHIHRYGSAHTDCIVTTDDKVAETFLRRVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGRGQVVNGDKDVVYTHKSLPLQ 716          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_VIGAC (Delta-1-pyrroline-5-carboxylate synthetase OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.989e-75
Identity = 139/182 (76.37%), Postives = 157/182 (86.26%), Query Frame = -3
Query:  371 DDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARF 916
            DDVIDLVIPRGSNKLVSQIK STKIPVLGHADGICHVYVDKSAN+++AK IV+DAK+DYPAACNAMETLL+HKDL   G L E++++L+ EGV L+GGP AS LL IP+   FHHEY+S+ CT EIVDDV AAIDHI+ +GSAHTD IVAED +VA  FL QVDSAAVFHNASTRF DGARF
Sbjct:  482 DDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANVEMAKRIVLDAKVDYPAACNAMETLLIHKDLIEKGWLKEIILDLRTEGVILYGGPVASSLLNIPQAHSFHHEYSSLACTAEIVDDVYAAIDHINLYGSAHTDSIVAEDNEVANVFLRQVDSAAVFHNASTRFSDGARF 663          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.994e-67
Identity = 132/237 (55.70%), Postives = 166/237 (70.04%), Query Frame = -3
Query:  218 DVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQG--VVYTHKNL 913
            D+IDL+IPRGS+ LV  ++E +K IPVLGHA+G+ HVY+DK  +   A  IV D+K DYP+ACNA ET+L+HKDLA     + L    + EGV L  GP+ + LLK   P       EY S+ CT+E+VD+V  A+ HI ++GS HT+ I+ E+   AE FL  VDSA  FHNASTRF DG RFGLGAEVGIST RIHARGPVGVEGLLTT+W+LRG GH+V+  +     Y H+NL
Sbjct:  544 DLIDLIIPRGSSDLVRSMQEKSKGIPVLGHAEGVWHVYIDKDCDEQKAIQIVRDSKCDYPSACNAAETILIHKDLATAPFFDSLCSMFKAEGVKLHAGPKLAALLKFAPPPAESMSFEYGSLECTLEVVDNVEEAVAHIIRYGSGHTESIITENTNTAEHFLKHVDSACAFHNASTRFADGYRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLLRGEGHLVEDFKNGKYSYLHENL 780          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_HUMAN (Delta-1-pyrroline-5-carboxylate synthetase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 3.401e-67
Identity = 130/241 (53.94%), Postives = 174/241 (72.20%), Query Frame = -3
Query:  212 DDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNLAL 916
            D +IDL+IPRGS++LV  I+++ K IPV+GH++GICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV ED+  AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL +
Sbjct:  549 DKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSLKYLHENLPI 789          
BLAST of CV885083 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.292e-66
Identity = 129/241 (53.53%), Postives = 174/241 (72.20%), Query Frame = -3
Query:  212 DDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNLAL 916
            D +IDL+IPRGS++LV  I+++ K IPV+GH++GICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV E++  AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL +
Sbjct:  549 DKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTENENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSLKYLHENLPI 789          
The following BLAST results are available for this feature:
BLAST of CV885083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
P5CS_ACTDE1.971e-10781.12Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS_SOLLC2.574e-10779.24Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS2_ARATH2.179e-10681.55Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
P5CS_MESCR3.479e-10479.32Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
P5CS1_ARATH1.012e-10376.37Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_ORYSJ2.255e-10377.97Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
P5CS_VIGAC1.989e-7576.37Delta-1-pyrroline-5-carboxylate synthetase OS=Vign... [more]
ALH13_CAEEL1.994e-6755.70Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
P5CS_HUMAN3.401e-6753.94Delta-1-pyrroline-5-carboxylate synthetase OS=Homo... [more]
P5CS_PONAB1.292e-6653.53Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012E06_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885083 ID=CV885083; Name=CV885083; organism=Citrus sinensis; type=EST; length=918bp
AATTCAAATTCTGAACTTCATTATTGACTTGAGGAAACTTTCTATTACAT
GAGGCTCTACCCCAAGCAAGATCCAAGTAATAAAACTAAAGATCTTAATA
AATAACATCAGCAAAGTGCAATAAATATACACCAAGTAAATAGAGTCTCA
GAAGCAGCTAGCATAATATTATACAAATGACATGGTTTAGAACCATAAGT
TACTAGGATTGCAAGGCAAGATTCTTGTGGGTATAGACGACTCCTTGATC
ACCATCTACGACGTGTCCATTCCCTCTCAATATCCATCGAGTAGTTAGCA
ATCCTTCAACTCCGACTGGACCGCGAGCATGAATCCTGCTTGTGCTTATT
CCAACCTCTGCACCAAGTCCAAATCGTGCTCCATCACAGAATCGTGTACT
TGCATTATGAAATACTGCAGCACTGTCAACTTGACATAAAAATGTTTCAG
CAACTTTTTGATCTTCTGCAACAATGCAATCAGTATGGGCACTTCCATGT
TGATGAATATGGTCAATAGCAGCACGCACATCGTCCACAATTTCAACCGT
ACAAACCATTGAGTTGTACTCATGATGGAATAAGCGTGTCTCAGGAATTT
TTAGTAATTTACTTGCTCTTGGTCCGCCAAATAAACCGACACCTTCATGT
TGAAGTTCTACAACAAGCTCATTGAGTGCACCATTGCATGCTAAATCCTT
GTGTACCAGAAGAGTTTCCATAGCATTGCAGGCTGCAGGATAGTCTATCT
TCGCATCAATAACAATGTTCTTTGCCACATCAAGGTTAGCCGATTTATCA
ACATAAACATGACAAATTCCATCAGCATGACCAAGTACAGGAATTTTTGT
TGACTCCTTGATTTGAGAAACCAGCTTATTGCTGCCTCTGGGGATAACAA
GATCTATCACATCATCAA
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