CV885075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI13_ARATH (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 2.927e-89 Identity = 163/221 (73.76%), Postives = 193/221 (87.33%), Query Frame = 3 Query: 87 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYFKLTR 749 MSQ FE YERQYCE+SA LS+KCT+A ALDGE KKQ LSEIK+G+++A+AL++KMDLEAR+L PNVK+ LL KLREYK+DLNN K EVKR+TSGN+N ARDELLE+GMAD + SADQR RL+MST+ L +TDRIK+SRRT+LETEELGVSILQDLH QRQSLL AH TLHGVDDN+ KSKKILT M+RRM+R+KW +G+II+VLV AI+ ILYFKLTR Sbjct: 1 MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 221
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI11_ARATH (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1 SV=2) HSP 1 Score: 323.553 bits (828), Expect = 9.416e-88 Identity = 160/221 (72.40%), Postives = 192/221 (86.88%), Query Frame = 3 Query: 87 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYFKLTR 749 MS VF+GYERQYCELSA LS+KC++A +LDGE KKQKLSEIK+GL++A+ LIRKMDLEAR+L PN+K+ LL KLRE+K+DLNN K EVKR+TSG +N AARDELLE+GMAD SADQR RL+MSTERL +TDR+K+SRRTM+ETEE+GVSILQDLH QRQSLL AH TLHGVDDNI KSKKILT M+RRM+++KW +G+II L+ AI +ILYFKLT+ Sbjct: 1 MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEARTLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQRARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIGKSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLTK 221
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI12_ARATH (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1 SV=3) HSP 1 Score: 303.138 bits (775), Expect = 1.317e-81 Identity = 155/221 (70.14%), Postives = 187/221 (84.62%), Query Frame = 3 Query: 87 MSQVFEGYERQYCELSAGLSRKCTAASAL-DGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYFKLT 746 MS VFEGYERQYCELS LSRKC +AS L +GE KK K++EIK+G+D+AD LIRKMDLEARSLQP+ KA+ LSKLREYK+DLN LK E KRV+S + ++R+EL+ESGMAD VSADQRGRL MS ERL+ S+DRI+ESRR MLETEE+G+SI+QDL QQRQ+LLHAHN LHGVDD I KSKK+LTAMSRRM+R+KWI+ S+I LV AI+LI+ +KL+ Sbjct: 1 MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEARSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQRGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAIDKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLS 221
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1A_MOUSE (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus GN=Vti1a PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.095e-27 Identity = 70/217 (32.26%), Postives = 122/217 (56.22%), Query Frame = 3 Query: 87 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYF 737 MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R + P + M +++R YK ++ L+ + KR A DE+ + DA S +QR LL +TERL S+ R++ + +ETE++G +L++L R+ + A + L D N+ KS +ILT M RR+ +++ ++ + ++V AIL + F Sbjct: 1 MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRI-----AYSDEVRNELLGDAGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLGKSSRILTGMLRRIIQNRILLVILGIIVVIAILTAIAF 212
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1A_RAT (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Rattus norvegicus GN=Vti1a PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.339e-25 Identity = 64/219 (29.22%), Postives = 124/219 (56.62%), Query Frame = 3 Query: 87 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMA--DAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYF 737 MS FEGYE+ + L+A ++ K + L + KKQ ++ ++ L++A L+ +MDLE R + P + M +++R YK ++ L+ + KR ++ + L ++G + + ++ ++R LL +TERL S+ R++ + +ETE++G +L++L R+ + A L D N+ KS +ILT M RR+ +++ ++ + ++V IL + F Sbjct: 1 MSADFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQLIKLREERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRARERLRETDANLGKSSRILTGMLRRIIQNRILLVILGIIVVITILTAITF 219
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1A_HUMAN (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens GN=VTI1A PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.133e-24 Identity = 64/192 (33.33%), Postives = 105/192 (54.69%), Query Frame = 3 Query: 87 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRR 662 MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R + P + M +++R YK ++ L+ + KR A DE+ + D S +QR LL +TERL S+ R++ + +ETE++G +L++L R+ + A L D N+ KS +ILT M RR Sbjct: 1 MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDDGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRILTGMLRR 187
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1_SCHPO (Vesicle transport v-SNARE protein vti1 OS=Schizosaccharomyces pombe GN=vti1 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21 Identity = 70/216 (32.41%), Postives = 114/216 (52.78%), Query Frame = 3 Query: 102 EGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAA---RDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYFK 740 E YE++Y L A + K S GE + + L++ D +I +M++E + + + ++ ++R Y++ L + +K + +A RDE SG A DQR RLL T RL S+ R+ ES+R ETE +G SIL+DLH QR L H+ L ++ +S + L M+RR++ +++ +II++LV ILL+LY K Sbjct: 2 ETYEQEYRLLRADIEEKLNDLSK-SGE--NSVIQSCQRLLNEIDEVIGQMEIEITGIPTSERGLVNGRIRSYRSTLEEWRRHLKEEIGKSDRKALFGNRDET--SGDYIASDQDYDQRTRLLQGTNRLEQSSQRLLESQRIANETEGIGASILRDLHGQRNQLEHSLEMLGDTSGHLDRSLRTLKTMARRLAMNRFFTTAIIAILVILILLVLYSK 212
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1_YEAST (t-SNARE VTI1 OS=Saccharomyces cerevisiae GN=VTI1 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 162 ASALDGELKKQKLSEIKTGL-------DDADALIRKMDLEARSL--QPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYFK 740 A A E Q LS+ T L D+ L+ +MD+E + + +A +KLRE+K +++++KR V+ RD L G +A + DQR +LL + L S DR+K++ R ETE +G I+ DL QR++L +A TL D + KS K L M+RR+ +K+I +II+VL+ ILL+L+ K Sbjct: 19 AKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDASERATYKAKLREWK---KTIQSDIKRPLQSLVDSGDRDRLF--GDLNASNIDDDQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQADSYVDKSIKTLKTMTRRLVANKFISYAIIAVLILLILLVLFSK 215
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1A_DICDI (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Dictyostelium discoideum GN=vti1A PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.585e-18 Identity = 60/218 (27.52%), Postives = 114/218 (52.29%), Query Frame = 3 Query: 96 VFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILLILYFKLTR 749 VFE E+ + + ++R+ GE KK + E++ +D+A I +M+ A++ +K L +K ++Y +D+ K EV+ + NQ + + D +QR LL + L+ ++DR+ + + ++E++G +IL DL +Q + + + LH DD I ++KI+T ++RR++ +K I+ II +L+ I LI+ K R Sbjct: 3 VFERTEQNFQHVCNSITRRIKQLPNYGGEKKKIAVREVENDIDEALKFISEMEKLAQNHPQRIK--LQTKTKQYHSDIQKYKREVQLAQLQSSNQTNSNPW-SNAPDDYQSQYDNQRQHLLQGSNMLDSTSDRLLRTHQISAQSEQIGQNILMDLGKQGEQIRGMRDKLHETDDQIKSARKIMTGIARRLATNKVILSIIILLLMGIIALIICLKWLR 217
BLAST of CV885075 vs. ExPASy Swiss-Prot
Match: VTI1B_RAT (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus GN=Vti1b PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18 Identity = 65/197 (32.99%), Postives = 106/197 (53.81%), Query Frame = 3 Query: 180 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDEL------LESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILTAMSRRMSRDKWIMGSIISVLVFAILL-ILYFKLTR 749 E KK+ + + +A+ + +M+ E R + ++SKLR Y+ DL L EV R T R +L LE+ + + QR LL TE LN +T I+ S R ET+++G I+++L +QR L + L ++N+SKS+KIL +MSR++ +K ++ S+I VL AIL+ ++Y+K R Sbjct: 39 EEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNSMMSKLRNYRKDLAKLHREV-RSTPLTATPGGRGDLKFGTYTLENEHLNRLQ---SQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTNENLSKSRKILRSMSRKVITNKLLL-SVIIVLELAILVGLVYYKFFR 230 The following BLAST results are available for this feature:
BLAST of CV885075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885075 ID=CV885075; Name=CV885075; organism=Citrus sinensis; type=EST; length=877bpback to top |