CV885020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885020 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 9.876e-68 Identity = 138/252 (54.76%), Postives = 176/252 (69.84%), Query Frame = 2 Query: 98 MACSSAALRTISSASVKLANSTSPTKSSSILVPFKLNNPFLITQCPHLQAATSCNFTVPKRSFTCR---------SQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEP 823 MA S+ +L++IS ++ + SS+L K I+ + +F+ P SFT + SQ + ++PRP+KVQEL VYEINE DR SP L+ + + LGDLVPF+NKLYTGDL+KR+GITAGLC++IE+ PEKKG+R+EA YSFYFGDYGH++VQGPYLTYED++LA+TGG+GIFEG YGQVKLQQLV+P KLFYTFYLKG+ DLP L G PV P +EP+P AKA EP Sbjct: 1 MASSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSFQNLGIS-------SNGSDFSYPS-SFTAKKNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEP 244
BLAST of CV885020 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.290e-67 Identity = 134/245 (54.69%), Postives = 172/245 (70.20%), Query Frame = 2 Query: 98 MACSSAALRTISSASVKLANSTSPTKSSSIL-VPFKLNNPFLITQCPHLQAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEP 823 M +S+A +IS +++ + + S+ L +N + + P L + F ++S+D RPTK+QEL+VYE NE DR SPA L+L +KP LGDLVPF+NKLYTGDL KR+GITAGLC+LI++ PEKKGDR+EA YSFYFGDYGHI+VQGPYLTYEDT+LA+TGGSG+FEG YGQVKL+QLV+P KLFYTFYLKG+ DLP L GK V+P V+P+ A+A +P Sbjct: 1 MIMASSAAASISMITLRNLSRNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQP 245
BLAST of CV885020 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.753e-67 Identity = 142/252 (56.35%), Postives = 178/252 (70.63%), Query Frame = 2 Query: 98 MACSSAALRTISSASVKLANSTSPTKSS--SILVPFK--LNNPFLITQCPHL----QAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEP 823 MA SSAA+ ++ S S+ N+ S S S L+ F N + + P ++ TS N V + F + +++ RP+K+QEL+VYE+NE DR SPA L+L +KP LGDLVPF+NKLYTGDL+KR+GITAGLC+LI++ PEK GDR+EA YSFYFGDYGH++VQG YLTYEDT+LAVTGGSGIFEG YGQVKL+QLV+P KLFYTFYLKG+ DLP L G V P V+P+P AKA EP Sbjct: 1 MASSSAAM-SLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFW--NWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEP 249
BLAST of CV885020 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 8.360e-67 Identity = 138/247 (55.87%), Postives = 178/247 (72.06%), Query Frame = 2 Query: 98 MACSSAALRTISSASVKLANSTSPTKSSSILVPFKLNNPFLITQC-PHLQAATSCNFTVPKRSFTCRSQANS---SDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEP 823 MA S+ +L++IS ++ + + SS+L K F I+ P + TS FT K+ R+ + + +++PRP+KVQEL VYEIN+ DR SP L+ + LGDLVPF+NKLYTGDL+KR+GITAGLC++IE+ PEK GDR+EA YSFYFGDYGH++VQGPYLTYED++LA+TGG+GIFEG YGQVKLQQLV+P KLFYTFYLKG+ DLP L+G PV P VEP+P AKA +P Sbjct: 1 MASSTISLQSISMTTLNNLSYSKQFHRSSLLGFSKSFQNFGISSNGPGSSSPTS--FTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKALKP 245 The following BLAST results are available for this feature:
BLAST of CV885020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885020 ID=CV885020; Name=CV885020; organism=Citrus sinensis; type=EST; length=824bpback to top |