CV884999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884999 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23 Identity = 89/219 (40.64%), Postives = 109/219 (49.77%), Query Frame = -3 Query: 247 KSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEEKPQV-----NQYGYMGSFPDDGELGFKPFVPTADDTPVYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAFDNQVKFLPMPYPEGSWEASLDAFLNGD--NTQDGG-NLMNLWSFDDFPSTLGGVY 879 K SVKAN QK V K +P P+L QN N + N+ +EEK QV NQ+G S D G G++ YF+SDQGSNSFDCS+FGW +QAP TP+ISS A + S ANP KKLKS + F+ PY W+ASLD FLN D TQD G N M+LWS D+ S +GGV+ Sbjct: 191 KRSVKANLQKPVAKPNPNP-SPALVQNSNIS-------FENMCFMEEKHQVSNNNNNQFGMTNSV-DAGCNGYQ-----------YFSSDQGSNSFDCSEFGWSDQAPITPDISS---AVINNNNSALFFEEANPAKKLKS--------------------MDFET-------PYNNTEWDASLD-FLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358
BLAST of CV884999 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.174e-23 Identity = 83/215 (38.60%), Postives = 114/215 (53.02%), Query Frame = -3 Query: 253 KSSVKANS-QKSV--PKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEEKPQV--NQYGYMGSFPDDGELGFKPFVPTADDTPVYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAF-DNQVKFLPMPYPEGSWEASLDAFLNGDNTQDGGNLMNLWSFDDFPSTLGG 879 + S K N+ QKSV P ++ VQ + + Y NNS + + ++S +EEKPQ+ NQ+G SF G G++ YF+SDQGSNSFDCS+FGW + PKTPEISS+L +E+ FV+ N KKLK NS+ SD+L+A+ DN + P+ EA L A G TQ+ N + LWS D+ L G Sbjct: 196 RPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNN---NEASFVEE-TNAAKKLKPNSDE------------SDDLMAYLDNALWDTPLEV-----EAMLGADA-GAVTQEEENPVELWSLDEINFMLEG 377
BLAST of CV884999 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19 Identity = 75/213 (35.21%), Postives = 108/213 (50.70%), Query Frame = -3 Query: 268 PKSSVKANSQKSVPKACLSPVQ--PSLNQNFNYLNNSDQDYYNNVSILEEKPQVNQYGYMGSFPDDGELGFKPFVPTADDT-PV---YFNSDQGSNSFDCSDFGWGEQAPKTPEISSV--LEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAFDNQVKFLPMPYPEGSWEASLDAFLNGDNTQDGGNLMNLWSFDDFP 882 P ++ K + + KA S V+ P++ FN L N++ Y + + KP V PD+ PFVP + P+ NSDQGSNSF CSDFGW E KTP+I+S+ + EVDES F+ + NPM PV +N+ L D + ++FL +G+ + S+D+ LN D +QD + M+LWSFDD P Sbjct: 179 PTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANANAFVYPSANFTSNKPFVQ--------PDN-----MPFVPAMNSAAPIEDPIINSDQGSNSFGCSDFGW-ENDTKTPDITSIAPISTIAEVDESAFIKSSTNPM---------VPPVMENSAVDLPD----LEPYMRFL---LDDGAGD-SIDSLLNLDGSQDVVSNMDLWSFDDMP 360 The following BLAST results are available for this feature:
BLAST of CV884999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884999 ID=CV884999; Name=CV884999; organism=Citrus sinensis; type=EST; length=884bpback to top |