EY665350

Overview
NameEY665350
Unique NameEY665350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length429
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10775 contig Csv1_Contig10775:1657..2088. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665350 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 1.622e-32
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 3 
Query:   12 DLTATIKLIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 242
            D+  TIK +D+LKIPYIAPSFGGCESIVDQPAIMSYWDL Q ERLKYGI DNLVRFSFGVEDFED+KAD+LQAL AI
Sbjct:  487 DIETTIKFVDSLKIPYIAPSFGGCESIVDQPAIMSYWDLPQEERLKYGIKDNLVRFSFGVEDFEDVKADILQALEAI 563
The following BLAST results are available for this feature:
BLAST of EY665350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
METB_ARATH1.622e-3284.42Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665350 ID=EY665350; Name=EY665350; organism=Citrus sinensis; type=EST; length=429bp
CCACGCGTCCGGACCTAACGGCCACCATAAAACTTATTGATGCCTTGAAA
ATCCCATATATTGCTCCATCCTTCGGTGGCTGTGAGAGCATTGTTGATCA
GCCAGCTATAATGTCGTATTGGGACCTTAGCCAATCGGAGAGGCTCAAGT
ATGGGATTATGGATAACTTGGTTCGCTTTAGCTTTGGAGTGGAAGATTTT
GAAGATTTGAAGGCTGATGTACTTCAGGCCCTGCACGCCATATAGAAGTG
TTTTTTGTGTTTCACCTTCGCAAATTTTTCATTTTACTTTTCCTAACGGC
ATTCTCTTTTGATGTTTGAATATGTTCGTTTTGTTATGTTTTAGTGACAA
TAATCCTTGAATAATCTTAAAACTTCATCTATAATGTTCTTCCTTTTCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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