CV884993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.084e-54 Identity = 98/125 (78.40%), Postives = 107/125 (85.60%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 ATS+LG NGSK IMIGS+KGINGGKVTKSVSCHQ+L+P LLYYCHSVPKVRVYEAD+LD N+KAKINHGVAICH+DTS+W P HGAF+ALGSGPGKIEVCHWIFENDMTW TAD Sbjct: 505 ATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTWATAD 629
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.334e-54 Identity = 98/125 (78.40%), Postives = 107/125 (85.60%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 ATS+LG NGSK IMIGS+KGINGGKVTKSVSCHQ+L+P LLYYCHSVPKVRVYEAD+LD N+KAKINHGVAICH+DTS+W P HGAF+ALGSGPGKIEVCHWIFENDMTW TAD Sbjct: 508 ATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTWATAD 632
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.188e-53 Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 ATS+LG GS IMIGSVKGINGGKVTKSVSCHQ+L+PYLLYYCHSVPKVRVYEAD+LD N+K KINHGVAICH+DTS+W P+HGAF+ALGSGPGKIEVCHWIFENDMTW AD Sbjct: 506 ATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHWIFENDMTWAIAD 630
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 7.210e-51 Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 ATS+LG GSK+K++IG V GINGGK+TK+VSCHQSL+PYLLYYCHSVPKVRVYEAD+L+ N+K KINHG+AICH+DTS+W P+HGAFLALGS PG+IEVCHWIFENDM W AD Sbjct: 502 ATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.606e-50 Identity = 90/125 (72.00%), Postives = 102/125 (81.60%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 ATS+LG GSKKK++IG V GINGG VT++VSCHQSL+PYLLYYCHSVP+VRVYE D+LD + KINHGVAICH+DTSAWSP+HGAFLALGSGPG+IEVCHWIFENDMTW D Sbjct: 500 ATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.673e-50 Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 ATS+LG GSK+K+MIG V GINGG+VTKSVSCHQSL+PYLLYYCHSVPKVRVYE+D+LD +KAKINHG+AICH+DTSAW HGAF+ LGS PG+IEVCHWIFENDM W AD Sbjct: 498 ATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.077e-46 Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 A +LG GS +I +G+V G++GGKVT+SVSCHQSLFPYL+YYCHSVPKVRVYEAD++ A++ KINHGVAICHLDTS WSPTHGAF+ALG PG++EVCHWIFE DMTWT AD Sbjct: 503 AVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVYEADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTWTVAD 627
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.154e-40 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = -3 Query: 512 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 886 A ++LG NG + IMIG VKGINGGK+T SVSCH+ LFPY++YYCHSVPK+RVYEA++L TK KIN GVAICH+DTSAW+ H AF+ALG PG+ +VCHWIF MTW AD Sbjct: 218 AVAMLGDDIVVRSTVLPNGPGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQTKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWVIAD 342
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = -3 Query: 566 ATSILGXXXXXXXXXXXNGSKKKIMIGSVKGIN-GGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGK 886 A +LG G + +G V G+ GG VT+SVSCHQSLFPYL+YYCHSVP VRVYEAD+L ++ KINHGVAICHLDTS WSP HGAF+ALG PGK Sbjct: 565 AVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGK 672
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 7.793e-13 Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = -3 Query: 521 VSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWT 766 ++CH +PY ++ CH R Y+A ++ + A VA+CH DT+ W+P H AF LG PG + VCH++ + + WT Sbjct: 242 IACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAV--EAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVWT 321 The following BLAST results are available for this feature:
BLAST of CV884993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884993 ID=CV884993; Name=CV884993; organism=Citrus sinensis; type=EST; length=888bpback to top |