CX043330

Overview
NameCX043330
Unique NameCX043330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043330 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17
Identity = 71/208 (34.13%), Postives = 111/208 (53.37%), Query Frame = -2 
Query:  139 NLVTFPEGGLPCAKLTRLEIYDCKRLEALPKGLHNLKSLQELRIGGELPSLE--EDDGLPTDLRSLEIIFNTKIWKSMIERGQGFHRFSSLRHLSIEGCDDDMVSFPPEAEDKRLGTALPLPASLTSMWIGDFPNLERLS-SSIVDLQNLTELRLHDCPKLKYFPEKGLPSSLLQLRIWGCPLMKEKCRKDGGQYWDLLTHIPFVLID 753
            NL TFP+GGLP  KL+ + + +CK+L+ALP+ L  L SL  L I  + P +E     G P++LR+L I    K+   +     G     +LR+L I+G ++D+ SFP E           LP S+ S+ I  F NL+ L+     D + +  + +  C KL+   ++ LP  L  LRI  C L+ E   +   +++ +L +IP+V ID
Sbjct: 1227 NLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFI-IKCPEIETIPGGGFPSNLRTLCISLCDKLTPRI---EWGLRDLENLRNLEIDGGNEDIESFPEEG---------LLPKSVFSLRISRFENLKTLNRKGFHDTKAIETMEISGCDKLQISIDEDLP-PLSCLRISSCSLLTETFAEVETEFFKVL-NIPYVEID 1419
The following BLAST results are available for this feature:
BLAST of CX043330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRL21_ARATH4.054e-1734.13Putative disease resistance protein At3g14460 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_10D06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10D06-H12-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043330 ID=CX043330; Name=CX043330; organism=Citrus sinensis; type=EST; length=757bp
TTTTAATCAAAAATAGTTTTCAACTAATATTTAAATTTTAAAATTACATA
CACAAACACGCCCAATTAAAAAAAAAAAGAGTAGTAATTATAAAATATTT
CAGTCGGCCTCTGTTCAGTCACCAAAAACCCATTTATAATCTATTAGGAC
AAAAGGTATATGGGTTAATAAGTCCCAATATTGTCCTCCATCCTTTCTGC
ACTTCTCTTTCATCAACGGACATCCCCAGATCCGTAATTGCAAAAGTGAG
GAAGGCAGGCCCTTCTCCGGGAAGTATTTGAGCTTGGGACAATCATGGAG
TCGCAATTCAGTGAGGTTTTGAAGATCAACAATTGAAGAAGATAGGCGTT
CCAGATTTGGAAAATCTCCAATCCACATAGATGTTAGAGAGGCAGGAAGA
GGAAGCGCGGTCCCCAATCTTTTGTCCTCTGCCTCTGGTGGAAATGACAC
CATGTCGTCATCACATCCTTCGATTGAAAGATGTCGCAGAGAGGAAAATC
TGTGAAATCCCTGGCCCCGCTCAATCATTGACTTCCAAATCTTCGTATTA
AAAATAATCTCAAGTGAACGAAGGTCGGTGGGAAGGCCATCATCTTCTTC
GAGGCTTGGAAGCTCACCTCCTATTCTTAATTCTTGAAGAGACTTCAGAT
TGTGCAATCCCTTGGGTAAGGCCTCTAGTCTCTTACAATCATATATCTCC
AACCTCGTGAGTTTCGCACAAGGCAATCCCCCTTCGGGAAAGGTCACCAG
ATTTCCA
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